RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TRBV5-3A0A0A0MS03 114 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 CXorf65A6NEN9 183 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 KCNJ18B7U540 433 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 TK1P04183 234 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 LYL1P12980 280 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ACP5P13686 325 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 PRF1P14222 555 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 PKMP14618 531 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 OAZ1P54368 228 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 GALNT3Q14435 633 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ISM2Q6H9L7 571 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ZNF425Q6IV72 752 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 MTFR2Q6P444 385 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 SLC30A9Q6PML9 568 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 RTL10Q7L3V2 364 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 MRPL10Q7Z7H8 261 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 C2CD5Q86YS7 1000 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 KLBQ86Z14 1044 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 SMG7Q92540 1137 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 TMEM79Q9BSE2 394 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 AAMDCQ9H7C9 122 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 HEY2Q9UBP5 337 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 LAMP3Q9UQV4 416 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 GPR52Q9Y2T5 361 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 DERAQ9Y315 318 aa5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-204ENST00000581226 ARID4BQ4LE39 1312 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 TTBK1Q5TCY1 1321 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 KIR2DS5A0A0G2JLQ3 304 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 NPIPB13A6NJU9 1138 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 NPIPB5A8MRT5 1133 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 NPIPB4C9JG80 1138 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 KIR2DS3K7RE56 304 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 RHODO00212 210 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 MOSPD3O75425 235 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 STAT1P42224 750 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 PPFIA1Q13136 1202 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 MTX1Q13505 466 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 DLGAP5Q15398 846 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF484Q5JVG2 852 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 B4GALNT4Q76KP1 1039 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 C1QL2Q7Z5L3 287 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 DDIASQ8IXT1 998 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 SMC5Q8IY18 1101 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 SLC44A5Q8NCS7 719 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 KAT2AQ92830 837 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 RBM17Q96I25 401 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 ZFYVE19Q96K21 471 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 TRMOQ9BU70 441 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 RRP7AQ9Y3A4 280 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF521Q96K83 1311 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 TCRBV7S3A2A0A539 114 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 STX16-NPEPL1H3BU86 382 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 STX16O14662 325 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 WNT1P04628 370 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 CSF1P09603 554 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 GSTM2P28161 218 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 CHRNA5P30532 468 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 PNPLA4P41247 253 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 PPM1FP49593 454 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 PAPOLAP51003 745 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 ZBTB16Q05516 673 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 GXYLT1Q4G148 440 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 RUNDC3AQ59EK9 446 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 FBXO47Q5MNV8 452 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 ANKRD18AQ8IVF6 992 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 HERC6Q8IVU3 1022 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 LINS1Q8NG48 757 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 CEP70Q8NHQ1 597 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 EME1Q96AY2 570 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 CLMNQ96JQ2 1002 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 ZSCAN31Q96LW9 406 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 COG8Q96MW5 612 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 HERC2P3Q9BVR0 1158 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 SLC22A11Q9NSA0 550 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 THAP1Q9NVV9 213 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 KLQ9UEF7 1012 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 AFG3L2Q9Y4W6 797 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 HS3ST3B1Q9Y662 390 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 DGKBQ9Y6T7 804 aa5.01□□□□□ -1.61
SMCHD1-204ENST00000581226 FOXO6A8MYZ6 492 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 SOCS2O14508 198 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 SYN3O14994 580 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 TLX3O43711 291 aaPredicted RBP5□□□□□ -1.61
SMCHD1-204ENST00000581226 CCNT1O60563 726 aaKnown RBP5□□□□□ -1.61
SMCHD1-204ENST00000581226 TMEM191BP0C7N4 346 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 CYP4B1P13584 511 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 HSD3B1P14060 373 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 AVPR2P30518 371 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 PTGER1P34995 402 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 ME1P48163 572 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 RPS6KA3P51812 740 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 RHAGQ02094 409 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms