RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 PRICKLE1Q96MT3 831 aaPredicted RBP15.67■□□□□ 0.1
SS18-215ENST00000580642 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 GDF3Q9NR23 364 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 HAUS2Q9NVX0 235 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 THG1LQ9NWX6 298 aaKnown RBP15.67■□□□□ 0.1
SS18-215ENST00000580642 MPP6Q9NZW5 540 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 TRHDEQ9UKU6 1024 aa15.67■□□□□ 0.1
SS18-215ENST00000580642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
SS18-215ENST00000580642 SGK1O00141 431 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
SS18-215ENST00000580642 CNTN5O94779 1100 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 RHOXF2BP0C7M4 288 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ITIH2P19823 946 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 CAV1Q03135 178 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 CBX2Q14781 532 aaPredicted RBP15.66■□□□□ 0.1
SS18-215ENST00000580642 PDGFRLQ15198 375 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 FAM78AQ5JUQ0 283 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 RFWD3Q6PCD5 774 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 GET4Q7L5D6 327 aaPredicted RBP15.66■□□□□ 0.1
SS18-215ENST00000580642 PCGF5Q86SE9 256 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ZC3H18Q86VM9 953 aaKnown RBP15.66■□□□□ 0.1
SS18-215ENST00000580642 CCDC13Q8IYE1 715 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ATPAF2Q8N5M1 289 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 BPIFB1Q8TDL5 484 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ING5Q8WYH8 240 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 SUSD6Q92537 303 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 LRRC45Q96CN5 670 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ZNF599Q96NL3 588 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 RHOXF2Q9BQY4 288 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 SLC2A11Q9BYW1 496 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 ZFP14Q9HCL3 533 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 WHRNQ9P202 907 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 PAK5Q9P286 719 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 CD207Q9UJ71 328 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 CCL26Q9Y258 94 aa15.66■□□□□ 0.1
SS18-215ENST00000580642 KCNN4O15554 427 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 OPHN1O60890 802 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 LUC7L3O95232 432 aaKnown RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 PENKP01210 267 aaPredicted RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 KRT14P02533 472 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 RPS24P62847 133 aaKnown RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 IFI35P80217 286 aaPredicted RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 TNK2Q07912 1038 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 POLD3Q15054 466 aaPredicted RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 MTSS1LQ765P7 747 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 OTOP3Q7RTS5 596 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 CCNYQ8ND76 341 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 FIBINQ8TAL6 211 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 IRF7Q92985 503 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 ELSPBP1Q96BH3 223 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 SLC39A8Q9C0K1 460 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 TSPYL1Q9H0U9 437 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 NOL6Q9H6R4 1146 aaKnown RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 EPS15L1Q9UBC2 864 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
SS18-215ENST00000580642 MFHAS1Q9Y4C4 1052 aa15.65■□□□□ 0.1
SS18-215ENST00000580642 TRIOBPQ9H2D6 2365 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 UQCRHLA0A096LP55 91 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 RASA4BC9J798 803 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 MATN3O15232 486 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 RASA4O43374 803 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 MAFKO60675 156 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 UQCRHP07919 91 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 RHOCP08134 193 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 RBL1P28749 1068 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 GUCY2DQ02846 1103 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 GNA12Q03113 381 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 DLX2Q07687 328 aaPredicted RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 IL10RBQ08334 325 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 AP1B1Q10567 949 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 SERINC3Q13530 473 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 HNRNPDQ14103 355 aaKnown RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 RFTN1Q14699 578 aaPredicted RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 BRD3Q15059 726 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 ADGRG2Q8IZP9 1017 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 CFAP52Q8N1V2 620 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 FAM71DQ8N9W8 422 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 DDI1Q8WTU0 396 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 NSMCE1Q8WV22 266 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 MAML1Q92585 1016 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 P2RY11Q96G91 374 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 LGMNQ99538 433 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 FAM118BQ9BPY3 351 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 FOXP3Q9BZS1 431 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 EPB41L5Q9HCM4 733 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 SPHK2Q9NRA0 654 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 KIAA1522Q9P206 1035 aaPredicted RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 IPO11Q9UI26 975 aaKnown RBP15.64■□□□□ 0.09
SS18-215ENST00000580642 HPCAL4Q9UM19 191 aa15.64■□□□□ 0.09
SS18-215ENST00000580642 PRRC2BQ5JSZ5 2229 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms