RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 SPAG5Q96R06 1193 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 CPXM1Q96SM3 734 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 NEUROG2Q9H2A3 272 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 IL21RQ9HBE5 538 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 AASDHPPTQ9NRN7 309 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 CYTH4Q9UIA0 394 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 FNDC3AQ9Y2H6 1198 aaKnown RBP14.14□□□□□ -0.15
GGA3-208ENST00000579743 SNX11Q9Y5W9 270 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3DA0A087WVF3 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3IA0A087WXS9 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3EA0A087X179 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3KA0A087X1G2 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3FA6NER0 549 aaPredicted RBP14.13□□□□□ -0.15
GGA3-208ENST00000579743 BECN2A8MW95 431 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3LB9A6J9 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 VILLO15195 856 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 YKT6O15498 198 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 PCDHGA12O60330 932 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 MAGEC1O60732 1142 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3HP0C7X1 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 PDGFRAP16234 1089 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 ERCC5P28715 1186 aaPredicted RBP14.13□□□□□ -0.15
GGA3-208ENST00000579743 NUDT1P36639 197 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 PSMD8P48556 350 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 CCR5P51681 352 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 KRT83P78385 493 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3GQ6DHY5 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3CQ6IPX1 549 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 NCEH1Q6PIU2 408 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 SLC26A9Q7LBE3 791 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 TBC1D3Q8IZP1 549 aaPredicted RBP14.13□□□□□ -0.15
GGA3-208ENST00000579743 APCDD1Q8J025 514 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 STK40Q8N2I9 435 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 OR14C36Q8NHC7 312 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 MYO19Q96H55 970 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 KDM4CQ9H3R0 1056 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 NDST4Q9H3R1 872 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 MTG2Q9H4K7 406 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 WDCPQ9H6R7 721 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 ACP6Q9NPH0 428 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 XPO7Q9UIA9 1087 aaKnown RBP14.13□□□□□ -0.15
GGA3-208ENST00000579743 SLCO3A1Q9UIG8 710 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 VPS28Q9UK41 221 aa14.13□□□□□ -0.15
GGA3-208ENST00000579743 C1QTNF3-AMACRE9PGA6 284 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 M0QYT0 321 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 FOXN3O00409 490 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 SLC7A4O43246 635 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 TNFSF14O43557 240 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 CBFA2T3O75081 653 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 DAB1O75553 588 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 GRAP2O75791 330 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 CD38P28907 300 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 CTSOP43234 321 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 ARRB1P49407 418 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 AUHQ13825 339 aaKnown RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 RAPGEF1Q13905 1077 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 TAF5Q15542 800 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 VWA3BQ502W6 1294 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 CT47A1Q5JQC4 288 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 BRMS1LQ5PSV4 323 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 FBXL22Q6P050 247 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 DBX2Q6ZNG2 339 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 FAM183BPQ6ZVS7 135 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 PRPF39Q86UA1 669 aaKnown RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 GALNT15Q8N3T1 639 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 PNPLA1Q8N8W4 532 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 ZNF397Q8NF99 534 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 PTPRN2Q92932 1015 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 MYEOVQ96EZ4 313 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 FAM129BQ96TA1 746 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 PRMT1Q99873 361 aaKnown RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 TUBGCP2Q9BSJ2 902 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 C2orf49Q9BVC5 232 aaPredicted RBP14.12□□□□□ -0.15
GGA3-208ENST00000579743 SIK2Q9H0K1 926 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 MUC3BQ9H195 1237 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 CLSTN2Q9H4D0 955 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 GDF3Q9NR23 364 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.12□□□□□ -0.15
GGA3-208ENST00000579743 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
GGA3-208ENST00000579743 MUC22E2RYF6 1773 aaPredicted RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 KMT2BQ9UMN6 2715 aaPredicted RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 ALOX15BO15296 676 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 IGHV4-34P06331 123 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 MZF1P28698 734 aaPredicted RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 CDH4P55283 916 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 RNASE9P60153 205 aaKnown RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 BNC1Q01954 994 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 EIF4EBP2Q13542 120 aaPredicted RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 OLFML1Q6UWY5 402 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.11□□□□□ -0.15
GGA3-208ENST00000579743 SLC47A2Q86VL8 602 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 ERICH1Q86X53 443 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 FAM71AQ8IYT1 594 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 OXR1Q8N573 874 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 WDTC1Q8N5D0 677 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 C18orf8Q96DM3 657 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 SERAC1Q96JX3 654 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 FEM1AQ9BSK4 669 aa14.11□□□□□ -0.15
GGA3-208ENST00000579743 TMEM121BQ9BXQ6 578 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms