RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 CREB5Q02930 508 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 RELAQ04206 551 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PPP3CAQ08209 521 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 RIPPLY1Q0D2K3 151 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 ORC2Q13416 577 aaPredicted RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 SPARCL1Q14515 664 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 SLC29A2Q14542 456 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 STARD3Q14849 445 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 RCN1Q15293 331 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 MPEG1Q2M385 716 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 SLC35G1Q2M3R5 365 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TRIM71Q2Q1W2 868 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 RABL6Q3YEC7 729 aaPredicted RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 DNAL1Q4LDG9 190 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 KHDC1Q4VXA5 237 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 PRAMEF18Q5VWM3 479 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 SLFN12LQ6IEE8 588 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 CENPPQ6IPU0 288 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 NEK10Q6ZWH5 1172 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PDZD4Q76G19 769 aaPredicted RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 MIGA2Q7L4E1 593 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 RRAGAQ7L523 313 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PEX26Q7Z412 305 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 NANOGNBQ7Z5D8 188 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PATL1Q86TB9 770 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 ECHDC2Q86YB7 292 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 KIF2BQ8N4N8 673 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 MINDY2Q8NBR6 621 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PHOSPHO1Q8TCT1 267 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 IGDCC4Q8TDY8 1250 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 UCMAQ8WVF2 138 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 GAB3Q8WWW8 586 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TRIM63Q969Q1 353 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 UBXN10Q96LJ8 280 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 OLFM1Q99784 485 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TSG101Q99816 390 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 CCT7Q99832 543 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 FOXB1Q99853 325 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 C7orf25Q9BPX7 421 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TMEM120AQ9BXJ8 343 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 CCSER1Q9C0I3 900 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PDGFDQ9GZP0 370 aaPredicted RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 ZCWPW1Q9H0M4 648 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 C1orf21Q9H246 121 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 AZI2Q9H6S1 392 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PIH1D3Q9NQM4 214 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 PFDN4Q9NQP4 134 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 ZDHHC18Q9NUE0 388 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TCP11L1Q9NUJ3 509 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TBC1D23Q9NUY8 699 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 RHBDL2Q9NX52 303 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 PCYOX1Q9UHG3 505 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 DBNLQ9UJU6 430 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 AMFRQ9UKV5 643 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 MTUS1Q9ULD2 1270 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 DENND2AQ9ULE3 1009 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 ZMYND8Q9ULU4 1186 aaPredicted RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 SIK3Q9Y2K2 1263 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 MYH15Q9Y2K3 1946 aa6.05□□□□□ -1.44
DDX42-210ENST00000579539 XRN1Q8IZH2 1706 aaKnown RBP6.05□□□□□ -1.44
DDX42-210ENST00000579539 IGSF1Q8N6C5 1336 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 C1orf167Q5SNV9 1468 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 N4BP2Q86UW6 1770 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 TMEM120BA0PK00 339 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 FAM47DPA6NHR8 397 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 FOXN3O00409 490 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 HGSO14964 777 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 PRPF4O43172 522 aaKnown RBP eCLIP6.04□□□□□ -1.44
DDX42-210ENST00000579539 PHGDHO43175 533 aaKnown RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 RIPK2O43353 540 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 SERPINB7O75635 380 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 TRMUO75648 421 aaKnown RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 CIAO1O76071 339 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 HPXP02790 462 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 RPL17P18621 184 aaKnown RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 MUTP22033 750 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 CALML3P27482 149 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 RXRGP48443 463 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 HSPA7P48741 367 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 HK3P52790 923 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 NOP14P78316 857 aaKnown RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 NKX6-1P78426 367 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 PLOD1Q02809 727 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 GRIN1Q05586 938 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 KLRC3Q07444 240 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 CALCOCO2Q13137 446 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 NOGQ13253 232 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 ITGA7Q13683 1181 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 DAG1Q14118 895 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 CHRNA2Q15822 529 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 ZNF829Q3KNS6 432 aaPredicted RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 WDR72Q3MJ13 1102 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 PARP10Q53GL7 1025 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 CCDC157Q569K6 752 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 INTS11Q5TA45 600 aaKnown RBP6.04□□□□□ -1.44
DDX42-210ENST00000579539 TMEM53Q6P2H8 277 aa6.04□□□□□ -1.44
DDX42-210ENST00000579539 ANO5Q75V66 913 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms