RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 ELAVL3Q14576 367 aaKnown RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 C5orf22Q49AR2 442 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 KIAA0895LQ68EN5 471 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 LRSAM1Q6UWE0 723 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSH2-208ENST00000579040 CIR1Q86X95 450 aaPredicted RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 ENOX1Q8TC92 643 aaKnown RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 GANCQ8TET4 914 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 NT5C3BQ969T7 300 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 C18orf8Q96DM3 657 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 PGAP3Q96FM1 320 aaPredicted RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 RPL10LQ96L21 214 aaKnown RBP11.89□□□□□ -0.51
SSH2-208ENST00000579040 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 STK33Q9BYT3 514 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 GAREM1Q9H706 876 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 TM9SF3Q9HD45 589 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSH2-208ENST00000579040 SLCO3A1Q9UIG8 710 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 NEUROG3Q9Y4Z2 214 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 PCDHB9Q9Y5E1 797 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 HS3ST4Q9Y661 456 aa11.89□□□□□ -0.51
SSH2-208ENST00000579040 IGF2RP11717 2491 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 A0A1B0GVT2 93 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 F8VZ95 297 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 SH3BP5O60239 455 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 PAGE1O75459 146 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 FSBPO95073 299 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 TPM2P07951 284 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 C5AR1P21730 350 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 MZF1P28698 734 aaPredicted RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 SLC8A1P32418 973 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 STK19P49842 368 aaPredicted RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 GALCP54803 685 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 CDH4P55283 916 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 ZNF177Q13360 481 aaPredicted RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 TRIP6Q15654 476 aaKnown RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 HLA-BQ31612 363 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 SLC25A52Q3SY17 297 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 OTUD1Q5VV17 481 aaPredicted RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 CDKAL1Q5VV42 579 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 RBM43Q6ZSC3 357 aaKnown RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 DSG4Q86SJ6 1040 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 GLRX5Q86SX6 157 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 ERICH1Q86X53 443 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 MMAAQ8IVH4 418 aaKnown RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 STK40Q8N2I9 435 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 OR2T34Q8NGX1 318 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 PTPRN2Q92932 1015 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 IGSF8Q969P0 613 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 ALG14Q96F25 216 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 SPAG5Q96R06 1193 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 FAM129BQ96TA1 746 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 OMDQ99983 421 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 FEM1AQ9BSK4 669 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 WDCPQ9H6R7 721 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 TM7SF3Q9NS93 570 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 PIGVQ9NUD9 493 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 ARHGEF38Q9NXL2 777 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 SERGEFQ9UGK8 458 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 SLC25A13Q9UJS0 675 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 VANGL2Q9ULK5 521 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 FNDC3AQ9Y2H6 1198 aaKnown RBP11.88□□□□□ -0.51
SSH2-208ENST00000579040 TBC1D30Q9Y2I9 924 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 PTPRBP23467 1997 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 CHD5Q8TDI0 1954 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 DOCK9Q9BZ29 2069 aa11.88□□□□□ -0.51
SSH2-208ENST00000579040 A0A1W2PP55 124 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 ALOX15BO15296 676 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 FLRT2O43155 660 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 ATP9BO43861 1147 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 DFNA5O60443 496 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 CBFA2T3O75081 653 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 RNASEH2AO75792 299 aaKnown RBP11.87□□□□□ -0.51
SSH2-208ENST00000579040 IGHV4-34P06331 123 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 GOT1P17174 413 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 PSMD8P48556 350 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 SULT1E1P49888 294 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 CCR5P51681 352 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 RACK1P63244 317 aaKnown RBP11.87□□□□□ -0.51
SSH2-208ENST00000579040 FAM193AP78312 1265 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 DEUP1Q05D60 604 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 SUZ12Q15022 739 aaKnown RBP11.87□□□□□ -0.51
SSH2-208ENST00000579040 FAM102AQ5T9C2 384 aaPredicted RBP11.87□□□□□ -0.51
SSH2-208ENST00000579040 TAF3Q5VWG9 929 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 NCEH1Q6PIU2 408 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 DBX2Q6ZNG2 339 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 ARCQ7LC44 396 aa11.87□□□□□ -0.51
SSH2-208ENST00000579040 NOP9Q86U38 636 aaKnown RBP11.87□□□□□ -0.51
SSH2-208ENST00000579040 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms