RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 PNPLA8Q9NP80 782 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 MARCH2Q9P0N8 246 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 FBXO10Q9UK96 956 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 CFAP45Q9UL16 551 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 AGO1Q9UL18 857 aaKnown RBP9.2□□□□□ -0.94
SNX11-205ENST00000578861 CLEC4EQ9ULY5 219 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 VPS4AQ9UN37 437 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 ZNF510Q9Y2H8 683 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 PCDHGA8Q9Y5G5 932 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 PCNX1Q96RV3 2341 aa9.2□□□□□ -0.94
SNX11-205ENST00000578861 PLXNA2O75051 1894 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 NPC1O15118 1278 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 NOBOXO60393 691 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 CYBBP04839 570 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 RXRGP48443 463 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 POLE2P56282 527 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 YWHAGP61981 247 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX11-205ENST00000578861 NAA30Q147X3 362 aaPredicted RBP9.19□□□□□ -0.94
SNX11-205ENST00000578861 BORAQ6PGQ7 559 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 INTS8Q75QN2 995 aaKnown RBP9.19□□□□□ -0.94
SNX11-205ENST00000578861 ANKS1BQ7Z6G8 1248 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 CLEC14AQ86T13 490 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 OXR1Q8N573 874 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 ZNF366Q8N895 744 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 WDR36Q8NI36 951 aaKnown RBP9.19□□□□□ -0.94
SNX11-205ENST00000578861 TMEM174Q8WUU8 243 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 HTR3CQ8WXA8 447 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 EEF2KMTQ96G04 330 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 PIWIL1Q96J94 861 aaKnown RBP9.19□□□□□ -0.94
SNX11-205ENST00000578861 CDK5RAP1Q96SZ6 601 aaKnown RBP9.19□□□□□ -0.94
SNX11-205ENST00000578861 EBF2Q9HAK2 575 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 SGK2Q9HBY8 427 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 ELOVL2Q9NXB9 296 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 CLIC5Q9NZA1 410 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 SEPT10Q9P0V9 454 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 RCOR1Q9UKL0 485 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 STRIP2Q9ULQ0 834 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 NCKAP1Q9Y2A7 1128 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 SLC27A6Q9Y2P4 619 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 ENTPD2Q9Y5L3 495 aa9.19□□□□□ -0.94
SNX11-205ENST00000578861 CPED1A4D0V7 1026 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CKMT1AP12532 417 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 TGM2P21980 687 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CMA1P23946 247 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 RPL13P26373 211 aaKnown RBP9.18□□□□□ -0.94
SNX11-205ENST00000578861 TKTL1P51854 596 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 ADAM9Q13443 819 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 TTC31Q49AM3 519 aaPredicted RBP9.18□□□□□ -0.94
SNX11-205ENST00000578861 FNDC3BQ53EP0 1204 aaKnown RBP9.18□□□□□ -0.94
SNX11-205ENST00000578861 TMEM215Q68D42 235 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 NCEH1Q6PIU2 408 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CRTC1Q6UUV9 634 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 SPATS2Q86XZ4 545 aaKnown RBP9.18□□□□□ -0.94
SNX11-205ENST00000578861 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 ARHGAP18Q8N392 663 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 SLC25A45Q8N413 288 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 ZNF276Q8N554 614 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 SLC4A11Q8NBS3 891 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 IFI44Q8TCB0 444 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CYB5D2Q8WUJ1 264 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 SEMA4DQ92854 862 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CCDC47Q96A33 483 aaKnown RBP9.18□□□□□ -0.94
SNX11-205ENST00000578861 ULBP1Q9BZM6 244 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 SYNDIG1Q9H7V2 258 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 TMEM8AQ9HCN3 771 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 CISHQ9NSE2 258 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 UCKL1Q9NWZ5 548 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 DKK3Q9UBP4 350 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 USP25Q9UHP3 1055 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 ITGB1BP2Q9UKP3 347 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 TRAF3IP3Q9Y228 551 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
SNX11-205ENST00000578861 NYNRINQ9P2P1 1898 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 CRYBG3Q68DQ2 2970 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 A0A1W2PR77 199 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 AGRPO00253 132 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 TULP2O00295 520 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 MAPK13O15264 365 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 ZBED1O96006 694 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 ITGA2BP08514 1039 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 PSMC2P35998 433 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 SYKP43405 635 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 NDUFA8P51970 172 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 RAD23BP54727 409 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 SLC8A3P57103 927 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 RPS14P62263 151 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 SFSWAPQ12872 951 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 ENPP2Q13822 863 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 GOLGA7BQ2TAP0 167 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 RBM44Q6ZP01 1051 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 HEATR4Q86WZ0 1026 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 OR4C6Q8NH72 309 aa9.17□□□□□ -0.94
SNX11-205ENST00000578861 C9orf43Q8TAL5 461 aaPredicted RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 NANOS1Q8WY41 292 aaKnown RBP9.17□□□□□ -0.94
SNX11-205ENST00000578861 EDEM1Q92611 657 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms