RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GRK7Q8WTQ7 553 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 RXFP2Q8WXD0 754 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 KCTD13Q8WZ19 329 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 GATA6Q92908 595 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 MAGOHBQ96A72 148 aaKnown RBP10.52□□□□□ -0.73
SS18-210ENST00000578700 SMARCD1Q96GM5 515 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 PNKPQ96T60 521 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 TRIM62Q9BVG3 475 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 FSCN3Q9NQT6 498 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 BCCIPQ9P287 314 aaKnown RBP eCLIP10.52□□□□□ -0.73
SS18-210ENST00000578700 UXTQ9UBK9 157 aaPredicted RBP10.52□□□□□ -0.73
SS18-210ENST00000578700 KLK13Q9UKR3 277 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 IGSF10Q6WRI0 2623 aa10.52□□□□□ -0.73
SS18-210ENST00000578700 CACNA1EQ15878 2313 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 HELZP42694 1942 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 CEP192Q8TEP8 1941 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 LRRD1A4D1F6 860 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 C2orf78A6NCI8 922 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 K7EQS6 105 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 PIK3R2O00459 728 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 SCAMP3O14828 347 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 HSF2BPO75031 334 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 ATP2C2O75185 946 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 ALDH1A2O94788 518 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 GAS8O95995 478 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 CFIP05156 583 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 GLI1P08151 1106 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 HDCP19113 662 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 TNFRSF8P28908 595 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 FNTAP49354 379 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 ATXN3P54252 364 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 MAP3K7CLP57077 242 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 TAS2R40P59535 323 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 VSNL1P62760 191 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 RPL10AP62906 217 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 SIM1P81133 766 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 LMAN2Q12907 356 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 NFE2Q16621 373 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 CCNI2Q6ZMN8 369 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 SLC26A9Q7LBE3 791 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 HDXQ7Z353 690 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 PIGZQ86VD9 579 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 SPATA2LQ8IUW3 424 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 FUKQ8N0W3 1084 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 GTPBP2Q9BX10 602 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 MAK16Q9BXY0 300 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 OSBPL8Q9BZF1 889 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 ZWILCHQ9H900 591 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 EPB41L5Q9HCM4 733 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 ZDHHC4Q9NPG8 344 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 TJP2Q9UDY2 1190 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 STAP1Q9ULZ2 295 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 NME7Q9Y5B8 376 aa10.51□□□□□ -0.73
SS18-210ENST00000578700 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
SS18-210ENST00000578700 PLXND1Q9Y4D7 1925 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 MYO18AQ92614 2054 aaKnown RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 CAPN9O14815 690 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 PAPSS1O43252 624 aaPredicted RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 RAD51CO43502 376 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 HCRTO43612 131 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 LRCH4O75427 683 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 GRAP2O75791 330 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 NFATC1O95644 943 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 ECEL1O95672 775 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 RALAP11233 206 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 ENGP17813 658 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 PTPN7P35236 360 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 RDXP35241 583 aaKnown RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 OPRD1P41143 372 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 PTGER3P43115 390 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 PTPN9P43378 593 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 SLC6A11P48066 632 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 RPL34P49207 117 aaKnown RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 TKTL1P51854 596 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 YWHAZP63104 245 aaKnown RBP10.5□□□□□ -0.73
SS18-210ENST00000578700 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 OGDHQ02218 1023 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-210ENST00000578700 KRT81Q14533 505 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 CRY1Q16526 586 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
SS18-210ENST00000578700 SCYL2Q6P3W7 929 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms