RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 FAM129AQ9BZQ8 928 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ANKZF1Q9H8Y5 726 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 MPP6Q9NZW5 540 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ZNF212Q9UDV6 495 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 MFHAS1Q9Y4C4 1052 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 BHMG1C9JSJ3 638 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 SGK1O00141 431 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 TBX10O75333 385 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 CNTN5O94779 1100 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 PRAMEF12O95522 483 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 CYBBP04839 570 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 OR1E1P30953 314 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ACTN2P35609 894 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 OXCT1P55809 520 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 PPIDQ08752 370 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ALFQ53S48 1182 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 C6orf118Q5T5N4 469 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ARHGAP12Q8IWW6 846 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 BBS7Q8IWZ6 715 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 NPWQ8N729 165 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ZNF557Q8N988 423 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 TDRD5Q8NAT2 981 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 ASB16Q96NS5 453 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 TMEM121Q9BTD3 319 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 MAGEH1Q9H213 219 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 FAM114A2Q9NRY5 505 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.21
SRSF1-202ENST00000578430 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 NEU2Q9Y3R4 380 aa13.77□□□□□ -0.21
SRSF1-202ENST00000578430 PRRC2BQ5JSZ5 2229 aaKnown RBP13.76□□□□□ -0.21
SRSF1-202ENST00000578430 ILVBLA1L0T0 632 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 RAMP2O60895 175 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 KRT14P02533 472 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 CCNCP24863 283 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 LTBRP36941 435 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 SLC7A5Q01650 507 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 CUL1Q13616 776 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 CBX2Q14781 532 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-202ENST00000578430 ELF2Q15723 593 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 P3H1Q32P28 736 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 RNF43Q68DV7 783 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 DUPD1Q68J44 220 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 GET4Q7L5D6 327 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-202ENST00000578430 TFAP2DQ7Z6R9 452 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 CCDC117Q8IWD4 279 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-202ENST00000578430 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 BBOF1Q8ND07 529 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 CCNYQ8ND76 341 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 HTR3CQ8WXA8 447 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 LRRC45Q96CN5 670 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 VAT1Q99536 393 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 APOL5Q9BWW9 433 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
SRSF1-202ENST00000578430 EPB41L5Q9HCM4 733 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 TBC1D30Q9Y2I9 924 aa13.76□□□□□ -0.21
SRSF1-202ENST00000578430 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 KCNN4O15554 427 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 TSPAN3O60637 253 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 TBL1XO60907 577 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 GCATO75600 419 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 RBL1P28749 1068 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 IRAK1P51617 712 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 RPS24P62847 133 aaKnown RBP13.75□□□□□ -0.21
SRSF1-202ENST00000578430 AP1B1Q10567 949 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-202ENST00000578430 ANO4Q32M45 955 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 FAM78AQ5JUQ0 283 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 CFAP52Q8N1V2 620 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 FAM71DQ8N9W8 422 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 SMRP1Q8NCR6 262 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 MYEOVQ96EZ4 313 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 CELF6Q96J87 481 aaKnown RBP13.75□□□□□ -0.21
SRSF1-202ENST00000578430 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
SRSF1-202ENST00000578430 SLC39A8Q9C0K1 460 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms