RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
ERBB2-205ENST00000578199 PLD6Q8N2A8 252 aaKnown RBP17.97■□□□□ 0.47
ERBB2-205ENST00000578199 MTG1Q9BT17 334 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-205ENST00000578199 NUDT5Q9UKK9 219 aa17.97■□□□□ 0.47
ERBB2-205ENST00000578199 CALB2P22676 271 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 YY1P25490 414 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 CDC25CP30307 473 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ARRB2P32121 409 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 KDSRQ06136 332 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 TRIM32Q13049 653 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 IRF5Q13568 498 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 UBAP2LQ14157 1087 aaKnown RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ARL13BQ3SXY8 428 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 RWDD4Q6NW29 188 aaKnown RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 KYAT3Q6YP21 454 aaKnown RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 C4orf50Q6ZRC1 276 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 OTOP3Q7RTS5 596 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 STRA8Q7Z7C7 330 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 DCLK2Q8N568 766 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ACVR1CQ8NER5 493 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ZNF570Q96NI8 536 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 PRDM16Q9HAZ2 1276 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 PADI3Q9ULW8 664 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 TTC3P53804 2025 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 TPBGLP0DKB5 382 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 THPOP40225 353 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 GARSP41250 739 aaKnown RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 TEDDM1Q5T9Z0 273 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 PDZD4Q76G19 769 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 CCNJLQ8IV13 435 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ARHGAP39Q9C0H5 1083 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 THAP1Q9NVV9 213 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 DNAJC16Q9Y2G8 782 aa17.96■□□□□ 0.47
ERBB2-205ENST00000578199 ZCWPW2A0A1B0GU75 182 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 GLRA3O75311 464 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SLC1A6P48664 564 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 CXCR3P49682 368 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 ERFP50548 548 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 KRT72Q14CN4 511 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 KCTD11Q693B1 232 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.95■□□□□ 0.46
ERBB2-205ENST00000578199 OR10T2Q8NGX3 314 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 MCUR1Q96AQ8 359 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 NAT9Q9BTE0 207 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 LRRC40Q9H9A6 602 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SNX15Q9NRS6 342 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 BFARQ9NZS9 450 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.95■□□□□ 0.46
ERBB2-205ENST00000578199 ARHGAP42A6NI28 874 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 CAPN14A8MX76 684 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 B2RBV5 119 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 IGHA2P01877 340 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 FAM163BP0C2L3 166 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 GNAZP19086 355 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 GP5P40197 560 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 IRF9Q00978 393 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 KPNB1Q14974 876 aaKnown RBP17.95■□□□□ 0.46
ERBB2-205ENST00000578199 ANKRD20A4Q4UJ75 823 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SPANXN3Q5MJ09 141 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 FSTL4Q6MZW2 842 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 SPATA22Q8NHS9 363 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 WDR60Q8WVS4 1066 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 ATP2A3Q93084 1043 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 MOCOSQ96EN8 888 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-205ENST00000578199 CSNK1G1Q9HCP0 422 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 ACSS2Q9NR19 701 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 PNPOQ9NVS9 261 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 DCDC2Q9UHG0 476 aa17.95■□□□□ 0.46
ERBB2-205ENST00000578199 PRR5-ARHGAP8B1AHC4 643 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 PROCP04070 461 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 AIF1P55008 147 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 ARHGAP8P85298 464 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 CD300LGQ6UXG3 332 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 TMEM135Q86UB9 458 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 RSPH3Q86UC2 560 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 SMC1BQ8NDV3 1235 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 DQX1Q8TE96 717 aaKnown RBP17.94■□□□□ 0.46
ERBB2-205ENST00000578199 HDAC11Q96DB2 347 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 EPAS1Q99814 870 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 WWP1Q9H0M0 922 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 GBA3Q9H227 469 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 SFMBT1Q9UHJ3 866 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 DFFAO00273 331 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 HNRNPCL1O60812 293 aaKnown RBP17.94■□□□□ 0.46
ERBB2-205ENST00000578199 PCSK1P29120 753 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 ELF1P32519 619 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 HCAR3P49019 387 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 GALNT2Q10471 571 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 WASHC2DQ5SRD0 308 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 IFNL1Q8IU54 200 aa17.94■□□□□ 0.46
ERBB2-205ENST00000578199 TEX9Q8N6V9 391 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms