RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 PTPRRQ15256 657 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 VWA1Q6PCB0 445 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 SLC39A5Q6ZMH5 540 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 PARS2Q7L3T8 475 aaKnown RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 PRPF39Q86UA1 669 aaKnown RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 NEK9Q8TD19 979 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 SSH3Q8TE77 659 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 FAM120BQ96EK7 910 aaKnown RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 RNFT2Q96EX2 444 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 CALML4Q96GE6 196 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 CCDC34Q96HJ3 373 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 PBKQ96KB5 322 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 HERC2P3Q9BVR0 1158 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 TEX101Q9BY14 249 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 ITPAQ9BY32 194 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 TTC12Q9H892 705 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 EHD2Q9NZN4 543 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 ADD3Q9UEY8 706 aaKnown RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 LIMA1Q9UHB6 759 aaKnown RBP5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 PSAT1Q9Y617 370 aa5.05□□□□□ -1.6
TRAPPC8-203ENST00000577474 FER1L4A9Z1Z3 1794 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 M0QZQ0 153 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 VILLO15195 856 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 TNFSF14O43557 240 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 HBP1O60381 514 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 NDUFA10O95299 355 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CSH1P0DML2 217 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CSH2P0DML3 217 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CYP4B1P13584 511 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ZFXP17010 805 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 NFKBIAP25963 317 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CXCR5P32302 372 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 GALNSP34059 522 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CLCN2P51788 898 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 MVDP53602 400 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ARHGAP8P85298 464 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 E2F1Q01094 437 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SP2Q02086 613 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 GUCY1B3Q02153 619 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 CREB5Q02930 508 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 DCTN2Q13561 401 aaKnown RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SPECC1Q5M775 1068 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 LAIR1Q6GTX8 287 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SLC30A6Q6NXT4 461 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 TMEM154Q6P9G4 183 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ZNF551Q7Z340 670 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 GALNT7Q86SF2 657 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 TAGAPQ8N103 731 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 TOR1AIP2Q8NFQ8 470 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ABHD11Q8NFV4 315 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 MYCBPAPQ8TBZ2 947 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SCFD2Q8WU76 684 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 RUFY2Q8WXA3 655 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 LPIN2Q92539 896 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 FAM149B1Q96BN6 582 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ELP4Q96EB1 424 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ASB2Q96Q27 587 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 PRR25Q96S07 402 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 EYA3Q99504 573 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 BAG1Q99933 345 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SLF1Q9BQI6 1058 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SFXN1Q9H9B4 322 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SAP30LQ9HAJ7 183 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 BRF2Q9HAW0 419 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SLC22A11Q9NSA0 550 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 SEPT11Q9NVA2 429 aaKnown RBP5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 MAP3K2Q9Y2U5 619 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 PIAS3Q9Y6X2 628 aa5.04□□□□□ -1.6
TRAPPC8-203ENST00000577474 ADGRA2Q96PE1 1338 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 hCG_1807616A0A1W2PRN6 198 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 NPIPB15A6NHN6 443 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 TMEM200CA6NKL6 621 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 PTGES3LE9PB15 166 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 P4HA2O15460 535 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 CA12O43570 354 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 C1RP00736 705 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 CHRM4P08173 479 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 PDHA1P08559 390 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 CTCFP49711 727 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 HNRNPMP52272 730 aaKnown RBP eCLIP5.03□□□□□ -1.63e-6■■■■□ 19.4
TRAPPC8-203ENST00000577474 UFM1P61960 85 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 PRAMEP78395 509 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 NEXNQ0ZGT2 675 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 SF3B3Q15393 1217 aaKnown RBP5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 GXYLT1Q4G148 440 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 PLEKHS1Q5SXH7 462 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 ANKRD16Q6P6B7 361 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 Q6ZWC4 215 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 IKBIPQ70UQ0 350 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 TTC39CQ8N584 583 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 SRBD1Q8N5C6 995 aaKnown RBP5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 C12orf76Q8N812 135 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 NKAIN3Q8N8D7 197 aa5.03□□□□□ -1.6
TRAPPC8-203ENST00000577474 BEND2Q8NDZ0 799 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms