RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 MINDY1Q8N5J2 469 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 SLC30A5Q8TAD4 765 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 PGAP3Q96FM1 320 aaPredicted RBP15.97■□□□□ 0.15
SF3B3-215ENST00000577085 MRGPRX3Q96LB0 322 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 CFAP57Q96MR6 1250 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 SGK2Q9HBY8 427 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 CAPN10Q9HC96 672 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 METTL5Q9NRN9 209 aaKnown RBP15.97■□□□□ 0.15
SF3B3-215ENST00000577085 ARHGEF38Q9NXL2 777 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 SLCO3A1Q9UIG8 710 aa15.97■□□□□ 0.15
SF3B3-215ENST00000577085 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 CEP192Q8TEP8 1941 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 CKAP5Q14008 2032 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 MUC22E2RYF6 1773 aaPredicted RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 FAM47DPA6NHR8 397 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 BCAT2O15382 392 aaPredicted RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 SRGAP2O75044 1071 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 RNASEH2AO75792 299 aaKnown RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 RHOCP08134 193 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 SDC4P31431 198 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ACSL1P33121 698 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 FLT3P36888 993 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 STK19P49842 368 aaPredicted RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 KRT83P78385 493 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ATP11AP98196 1134 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 CST6Q15828 149 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 FILIP1LQ4L180 1135 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 C9orf64Q5T6V5 341 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 USP30Q70CQ3 517 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 MMAAQ8IVH4 418 aaKnown RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 DNASE2BQ8WZ79 361 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 NT5C3BQ969T7 300 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 MYO19Q96H55 970 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ERGIC2Q96RQ1 377 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 C11orf70Q9BRQ4 267 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 FEM1AQ9BSK4 669 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ZDHHC5Q9C0B5 715 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 FBXL12Q9NXK8 326 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 TMEM63CQ9P1W3 806 aa15.96■□□□□ 0.15
SF3B3-215ENST00000577085 EIF2B4Q9UI10 523 aaKnown RBP15.96■□□□□ 0.15
SF3B3-215ENST00000577085 ITIH6Q6UXX5 1313 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 FSBPO95073 299 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 IL1BP01584 269 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 CYP1A1P04798 512 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 CEACAM1P13688 526 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 CSRP1P21291 193 aaKnown RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 MMP8P22894 467 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 PSMD8P48556 350 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 PLK1P53350 603 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 FMO1Q01740 532 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 ELAVL3Q14576 367 aaKnown RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 TEAD4Q15561 434 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 CDO1Q16878 200 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 C6orf118Q5T5N4 469 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 N4BP2L1Q5TBK1 243 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 CXorf57Q6NSI4 855 aaKnown RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 ARCQ7LC44 396 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 DSG4Q86SJ6 1040 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 PHLDB2Q86SQ0 1253 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 C14orf80Q86SX3 495 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 EMC1Q8N766 993 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 C1orf74Q96LT6 269 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 C2orf49Q9BVC5 232 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 C6orf106Q9H6K1 298 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-215ENST00000577085 ADAM22Q9P0K1 906 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 TMEM59LQ9UK28 342 aa15.95■□□□□ 0.14
SF3B3-215ENST00000577085 A0A1W2PP55 124 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ANKRD62A6NC57 917 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 LRRC72A6NJI9 287 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 MID1O15344 667 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ADH1BP00325 375 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 CALB1P05937 261 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ATP1A3P13637 1013 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 DESP17661 470 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 CHRNB2P17787 502 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 SLC8A1P32418 973 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 IRAK1P51617 712 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 AFF3P51826 1226 aaKnown RBP15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ZNF252P-AS1Q0IIN9 211 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 NCAPHQ15003 741 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 IL27RAQ6UWB1 636 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 TFAP2DQ7Z6R9 452 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 FAM131BQ86XD5 332 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 STK40Q8N2I9 435 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 DEFB124Q8NES8 71 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 HAPLN3Q96S86 360 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 BPIFA3Q9BQP9 254 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 SELENOOQ9BVL4 669 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ADAM33Q9BZ11 813 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 TBC1D30Q9Y2I9 924 aa15.94■□□□□ 0.14
SF3B3-215ENST00000577085 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.94■□□□□ 0.14
SF3B3-215ENST00000577085 FARP1Q9Y4F1 1045 aaPredicted RBP15.94■□□□□ 0.14
SF3B3-215ENST00000577085 CACNA1AO00555 2505 aa15.93■□□□□ 0.14
SF3B3-215ENST00000577085 E9PAM4 449 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms