RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TMEM132BQ14DG7 1078 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CWF19L1Q69YN2 538 aaKnown RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PQLC1Q8N2U9 271 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 DNAJB14Q8TBM8 379 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CIB1Q99828 191 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 DGCR6LQ9BY27 220 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 KLHL25Q9H0H3 589 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ADAM7Q9H2U9 754 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 DMAP1Q9NPF5 467 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 XPR1Q9UBH6 696 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PRKAG3Q9UGI9 489 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PSMD12O00232 456 aaPredicted RBP18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CLDN5O00501 218 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 HDAC3O15379 428 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CSH1P0DML2 217 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CSH2P0DML3 217 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 UQCRBP14927 111 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 BFSP2Q13515 415 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 ILDR2Q71H61 639 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 ANKS1BQ7Z6G8 1248 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 SATL1Q86VE3 508 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 PYROXD2Q8N2H3 581 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 ULBP1Q9BZM6 244 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 TMEM216Q9P0N5 145 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 RNF112Q9ULX5 631 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 F8W8V4 182 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 KATNA1O75449 491 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 NFKB1P19838 968 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 PIK3R1P27986 724 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CDC16Q13042 620 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 PIGZQ86VD9 579 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 P2RY11Q96G91 374 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 RGSL1A5PLK6 1076 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 GAS2O43903 313 aaKnown RBP18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 DAB1O75553 588 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 CYP1A1P04798 512 aaPredicted RBP18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 PIRTP0C851 137 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 MAB21L3Q8N8X9 362 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 ROGDIQ9GZN7 287 aa18.22■□□□□ 0.51
ATPAF1-214ENST00000576409 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 MTA2O94776 668 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 PCNAP12004 261 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 GPX6P59796 221 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 PSME3P61289 254 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 CHRNB3Q05901 458 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 LRRC74AQ0VAA2 488 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 FBXO48Q5FWF7 155 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 LRRC8BQ6P9F7 803 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 MFSD3Q96ES6 412 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 ALG9Q9H6U8 611 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 DDX43Q9NXZ2 648 aaKnown RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 LRFN2Q9ULH4 789 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 FAM95CA0A1B0GW59 222 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 OGDHQ02218 1023 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 ZNF483Q8TF39 744 aaPredicted RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 DOLKQ9UPQ8 538 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 AAR2Q9Y312 384 aaKnown RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 PCDHA11Q9Y5I1 949 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 LTFP02788 710 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 ERCC2P18074 760 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 ITGB6P18564 788 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 LSM3P62310 102 aaKnown RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 MTX3Q5HYI7 312 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 GLMNQ92990 594 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 PRR11Q96HE9 360 aaPredicted RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 NR1H4Q96RI1 486 aaPredicted RBP18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 RNF181Q9P0P0 153 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 CDH22Q9UJ99 828 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 SLC30A1Q9Y6M5 507 aa18.21■□□□□ 0.51
ATPAF1-214ENST00000576409 PCSK1P29120 753 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 GSTA3Q16772 222 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 UBE2OQ9C0C9 1292 aaKnown RBP18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 ELOVL4Q9GZR5 314 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 ASB7Q9H672 318 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 ARHGAP28Q9P2N2 729 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 ATP11BQ9Y2G3 1177 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 AP3B1O00203 1094 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 DEAF1O75398 565 aaPredicted RBP18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 AMHP03971 560 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 CCDC166P0CW27 439 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 XYLT1Q86Y38 959 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 SIAH1Q8IUQ4 282 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 SEPT5Q99719 369 aaPredicted RBP18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 TBCDQ9BTW9 1192 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 TKTL2Q9H0I9 626 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 BLOC1S6Q9UL45 172 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 FAM149AA5PLN7 773 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 SLCO1B7G3V0H7 640 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 PSMD3O43242 534 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 VNN1O95497 513 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 GABRB2P47870 512 aa18.2■□□□□ 0.5
ATPAF1-214ENST00000576409 AASDHQ4L235 1098 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms