RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 CNTN5O94779 1100 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 EGFP01133 1207 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 PYGMP11217 842 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 PABPC1P11940 636 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 RHOQP17081 205 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 AOC1P19801 751 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 AMPD1P23109 780 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 EPHB2P29323 1055 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 HCAR3P49019 387 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 TPI1P60174 286 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 SEMA3BQ13214 749 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 SLC12A1Q13621 1099 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 LLGL1Q15334 1064 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 ANKRD20A8PQ5CZ79 823 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 ARTNQ5T4W7 220 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 C6orf118Q5T5N4 469 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 MFSD7Q6UXD7 560 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 EXD1Q8NHP7 514 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 ALG3Q92685 438 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 P2RY11Q96G91 374 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 WDR24Q96S15 920 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 MAK16Q9BXY0 300 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 ABCB8Q9NUT2 735 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-214ENST00000573876 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 C3orf70A6NLC5 250 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 PRR33A8MZF0 331 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 KCNK3O14649 394 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 TRIM24O15164 1050 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 ATP1A1P05023 1023 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 RHOCP08134 193 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CHRNB1P11230 501 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 OR1E1P30953 314 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CASQ1P31415 396 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CETN2P41208 172 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 IRAK1P51617 712 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 LMAN2Q12907 356 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 ZNF211Q13398 564 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CCINQ13939 588 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 DMC1Q14565 340 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 EIF4HQ15056 248 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 ALFQ53S48 1182 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 MANEALQ5VSG8 457 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CWF19L1Q69YN2 538 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 TFAP2DQ7Z6R9 452 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 AHI1Q8N157 1196 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 PHTF2Q8N3S3 785 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CLDN23Q96B33 292 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 RNF157Q96PX1 679 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 PSMB7Q99436 277 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 IER2Q9BTL4 223 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CIPCQ9C0C6 399 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
NPLOC4-214ENST00000573876 CTAGE9A4FU28 777 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 ATG13O75143 517 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 RNF40O75150 1001 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 ATP5BP06576 529 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 DCNP07585 359 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 KRT10P13645 584 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 ERCC2P18074 760 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 POLR2EP19388 210 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 HLA-FP30511 346 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 CXCR5P32302 372 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 CD70P32970 193 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 CDKN2BP42772 138 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 MAPKAPK2P49137 400 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 SEC13P55735 322 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 MRPS21P82921 87 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 GEN1Q17RS7 908 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 KAZNQ674X7 775 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 AADACL2Q6P093 401 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 TRMT11Q7Z4G4 463 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 SETD3Q86TU7 594 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 ZNF687Q8N1G0 1237 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 PCDH19Q8TAB3 1148 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 WFDC5Q8TCV5 224 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 TSC1Q92574 1164 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 ACDQ96AP0 544 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 HEMGNQ9BXL5 484 aa13.24□□□□□ -0.29
NPLOC4-214ENST00000573876 MUC3BQ9H195 1237 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms