RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 A0A1B0GVT2 93 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 UPK3BL1B0FP48 263 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 UPK3BL2E5RIL1 263 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 F8VZ95 297 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 BNIP3LO60238 219 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SH3BP5O60239 455 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 PAGE1O75459 146 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 GFPT2O94808 682 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 ADH1BP00325 375 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 IL1BP01584 269 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 MMEP08473 750 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SPINK2P20155 84 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 CSNK1EP49674 416 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 KRT31Q15323 416 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 BRMS1LQ5PSV4 323 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 NAA35Q5VZE5 725 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 USP30Q70CQ3 517 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 PIP4P1Q86T03 277 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 NAXDQ8IW45 347 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 STK40Q8N2I9 435 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 ENOX1Q8TC92 643 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SETD7Q8WTS6 366 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 IGSF8Q969P0 613 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 BIRC7Q96CA5 298 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SPAG5Q96R06 1193 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 TBCBQ99426 244 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 STK33Q9BYT3 514 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 TKTL2Q9H0I9 626 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 WDCPQ9H6R7 721 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SERGEFQ9UGK8 458 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 SLCO3A1Q9UIG8 710 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 PTPRBP23467 1997 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 KMT2BQ9UMN6 2715 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 KNL1Q8NG31 2342 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CLDN11O75508 207 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 TOP3BO95985 862 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 F9P00740 461 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 RHOCP08134 193 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CD59P13987 128 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 ZNF18P17022 549 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CD27P26842 260 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC8A1P32418 973 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CDH5P33151 784 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 KLK7P49862 253 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 IRAK1P51617 712 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CDH4P55283 916 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 EIF4EBP2Q13542 120 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 HNRNPDQ14103 355 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 ELAVL3Q14576 367 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 STX1AQ16623 288 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 HLA-BQ31612 363 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 C9orf64Q5T6V5 341 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 OTUD1Q5VV17 481 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 KIAA0895LQ68EN5 471 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 NCEH1Q6PIU2 408 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 LAYNQ6UX15 382 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 LRRC31Q6UY01 552 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 DSG4Q86SJ6 1040 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 C14orf80Q86SX3 495 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 XYLT1Q86Y38 959 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 OR14C36Q8NHC7 312 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 GPT2Q8TD30 523 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CPA5Q8WXQ8 436 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 OR8D1Q8WZ84 308 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CAMK1GQ96NX5 476 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 NPY6RQ99463 290 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 SCNM1Q9BWG6 230 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 NAA15Q9BXJ9 866 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 ADAM33Q9BZ11 813 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 GANQ9H2C0 597 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 TM9SF3Q9HD45 589 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 NLRC4Q9NPP4 1024 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 METTL5Q9NRN9 209 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 TM7SF3Q9NS93 570 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 ANO10Q9NW15 660 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 FZD4Q9ULV1 537 aa9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 FNDC3AQ9Y2H6 1198 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-212ENST00000573328 CABIN1Q9Y6J0 2220 aa9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 TDRD6O60522 2096 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 C1QTNF3-AMACRE9PGA6 284 aa9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 HYAL3O43820 417 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 GJB3O75712 270 aa9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 ADCY5O95622 1261 aa9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 VAV1P15498 845 aa9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-212ENST00000573328 FLT3P36888 993 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms