RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PRKCZQ05513 592 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 KRT72Q14CN4 511 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 WLSQ5T9L3 541 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 RASSF3Q86WH2 238 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
POLR2A-201ENST00000572844 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 MLPHQ9BV36 600 aaPredicted RBP16.67■□□□□ 0.26
POLR2A-201ENST00000572844 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 NEU3Q9UQ49 428 aa16.67■□□□□ 0.26
POLR2A-201ENST00000572844 TNFRSF10BO14763 440 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 FGF10O15520 208 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 HAUS5O94927 633 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 EOMESO95936 686 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 CCNCP24863 283 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 MAGEA12P43365 314 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 ZBTB17Q13105 803 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PRPSAP1Q14558 356 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 LZTR1Q8N653 840 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 RNF34Q969K3 372 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 UTP4Q969X6 686 aaKnown RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 RGS18Q9NS28 235 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 TPP1O14773 563 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 CCND3P30281 292 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 NRG1Q02297 640 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PDE1CQ14123 709 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PREPLQ4J6C6 727 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PAN2Q504Q3 1202 aaKnown RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 MANEALQ5VSG8 457 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 FCRL3Q96P31 734 aaPredicted RBP16.66■□□□□ 0.26
POLR2A-201ENST00000572844 TMEM209Q96SK2 561 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 MECRQ9BV79 373 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 IL22Q9GZX6 179 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 THAP1Q9NVV9 213 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 TXNDC16Q9P2K2 825 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 EMCNQ9ULC0 261 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 INPP5FQ9Y2H2 1132 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 SNX10Q9Y5X0 201 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 PSAT1Q9Y617 370 aa16.66■□□□□ 0.26
POLR2A-201ENST00000572844 ZCWPW2A0A1B0GU75 182 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 ARHGAP42A6NI28 874 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 PLIN3O60664 434 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 GSRP00390 522 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 NFKB1P19838 968 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 CCND1P24385 295 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 LINC00523Q86TU6 105 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 CRLF3Q8IUI8 442 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 SPATA2LQ8IUW3 424 aaPredicted RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 PPP1R2P1Q96PQ5 205 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 RBBP8Q99708 897 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 CATSPERBQ9H7T0 1116 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 PIH1D1Q9NWS0 290 aaKnown RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 SOX13Q9UN79 622 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 STK38LQ9Y2H1 464 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 NUMBLQ9Y6R0 609 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 CBX6O95503 412 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 MYL2P10916 166 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 PDE1BQ01064 536 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 STX3Q13277 289 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 DNAAF3Q8N9W5 541 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 ZNF669Q96BR6 464 aaPredicted RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 PTCD3Q96EY7 689 aaKnown RBP16.65■□□□□ 0.26
POLR2A-201ENST00000572844 NSL1Q96IY1 281 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 AGAP3Q96P47 875 aa16.65■□□□□ 0.26
POLR2A-201ENST00000572844 CCDC22O60826 627 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 ITGB1P05556 798 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 ERVK-10P10266 1014 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 SERPINB3P29508 390 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 CCR1P32246 355 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 LIMK2P53671 638 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 SLC5A3P53794 718 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 CSE1LP55060 971 aaKnown RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 ZBTB16Q05516 673 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 DSC1Q08554 894 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 N4BP2L1Q5TBK1 243 aaPredicted RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 CES4AQ5XG92 561 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 CCDC117Q8IWD4 279 aaPredicted RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 ARHGAP12Q8IWW6 846 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 HASPINQ8TF76 798 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 IL12RB2Q99665 862 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 TBC1D10AQ9BXI6 508 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 SLC17A6Q9P2U8 582 aa16.64■□□□□ 0.25
POLR2A-201ENST00000572844 AAR2Q9Y312 384 aaKnown RBP16.64■□□□□ 0.25
POLR2A-201ENST00000572844 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
POLR2A-201ENST00000572844 OAZ2O95190 189 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms