RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 CLEC4EQ9ULY5 219 aa8.03□□□□□ -1.12
SMG6-211ENST00000572369 STARD13Q9Y3M8 1113 aa8.03□□□□□ -1.12
SMG6-211ENST00000572369 HS3ST4Q9Y661 456 aa8.03□□□□□ -1.12
SMG6-211ENST00000572369 SCINQ9Y6U3 715 aa8.03□□□□□ -1.12
SMG6-211ENST00000572369 RELNP78509 3460 aa8.02□□□□□ -1.12
SMG6-211ENST00000572369 CELSR3Q9NYQ7 3312 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 A0A1B0GVM2 712 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 TCAF2A6NFQ2 919 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 WASH3PC4AMC7 463 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 DDX3XO00571 662 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG6-211ENST00000572369 NPC1O15118 1278 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CCP110O43303 1012 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ATMINO43313 823 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 RNF8O76064 485 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 EPHX1P07099 455 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 PLEKP08567 350 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 HNRNPLP14866 589 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG6-211ENST00000572369 PSMA2P25787 234 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 HLA-FP30511 346 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CD70P32970 193 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CNR2P34972 360 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 NNMTP40261 264 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 PTPN9P43378 593 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ADKP55263 362 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 OXCT1P55809 520 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 GSCP56915 257 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 RPL7AP62424 266 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 EIF4EBP2Q13542 120 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 AUHQ13825 339 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 SIM2Q14190 667 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 ZNF234Q14588 700 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CCDC14Q49A88 953 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 USP39Q53GS9 565 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 CCDC122Q5T0U0 273 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ACBD5Q5T8D3 534 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 STPG1Q5TH74 334 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 OTUD1Q5VV17 481 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 HGSNATQ68CP4 663 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 MBLAC2Q68D91 279 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 TRNP1Q6NT89 227 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 STRADAQ7RTN6 431 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 WDR5BQ86VZ2 330 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CIR1Q86X95 450 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 DNAAF5Q86Y56 855 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CCAR2Q8N163 923 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 FIBINQ8TAL6 211 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 WFDC5Q8TCV5 224 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CYB5D2Q8WUJ1 264 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 SORCS1Q8WY21 1168 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 NT5C3BQ969T7 300 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 MYEOVQ96EZ4 313 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 P2RY11Q96G91 374 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 LRIG1Q96JA1 1093 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ACOX2Q99424 681 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 PRMT1Q99873 361 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 SYT11Q9BT88 431 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 MUC3BQ9H195 1237 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 MRPL47Q9HD33 250 aaKnown RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 TMPRSS4Q9NRS4 437 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 ARHGEF38Q9NXL2 777 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 CALCOCO1Q9P1Z2 691 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 STON1Q9Y6Q2 735 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 EML5Q05BV3 1969 aa8.02□□□□□ -1.13
SMG6-211ENST00000572369 UBR5O95071 2799 aaPredicted RBP8.02□□□□□ -1.13
SMG6-211ENST00000572369 MYO18AQ92614 2054 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 CCDC163A0A0D9SF12 145 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 C2CD4BA6NLJ0 364 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 AKR1B15C9JRZ8 316 aaPredicted RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 E9PAM4 449 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 TK2O00142 265 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 GFRA2O00451 464 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 GIPC1O14908 333 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 AKR1B10O60218 316 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 ADAM23O75077 832 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 CLDN11O75508 207 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 RPP40O75818 363 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 ASLP04424 464 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 MYBL1P10243 752 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 ACADMP11310 421 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 TDGF1P13385 188 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 HOXA6P31267 233 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 HOXC13P31276 330 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 EIF4A3P38919 411 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 IL12RB1P42701 662 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 NUMBP49757 651 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 ZNF143P52747 638 aaPredicted RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 CDH4P55283 916 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 LMAN2Q12907 356 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 SRSF5Q13243 272 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 SLC12A1Q13621 1099 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 BYSLQ13895 437 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 PITRM1Q5JRX3 1037 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 RWDD4Q6NW29 188 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 ALKBH5Q6P6C2 394 aaKnown RBP8.01□□□□□ -1.13
SMG6-211ENST00000572369 SARM1Q6SZW1 724 aa8.01□□□□□ -1.13
SMG6-211ENST00000572369 KIAA1324Q6UXG2 1013 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms