RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 TMEM35BQ8NCS4 154 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 FAM129BQ96TA1 746 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 TM7SF3Q9NS93 570 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 VANGL2Q9ULK5 521 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 PCDHB9Q9Y5E1 797 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 HS3ST4Q9Y661 456 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 CHD6Q8TD26 2715 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 PLXNA2O75051 1894 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 TMEM131Q92545 1883 aa17.86■□□□□ 0.45
LITAF-211ENST00000572255 FAM47DPA6NHR8 397 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 ZZEF1O43149 2961 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 PAGE1O75459 146 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 RNASEH2AO75792 299 aaKnown RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 TRIM16O95361 564 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 IGHV4-34P06331 123 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 EEF1GP26641 437 aaKnown RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 RDXP35241 583 aaKnown RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 GGCXP38435 758 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 NNMTP40261 264 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 GRIA4P48058 902 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 PSMD8P48556 350 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 GALCP54803 685 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 ZNF423Q2M1K9 1284 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 KIF19Q2TAC6 998 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 TCP11X2Q5H9J9 407 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 CT47A1Q5JQC4 288 aaPredicted RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 PTPRN2Q92932 1015 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 NPY6RQ99463 290 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 OMDQ99983 421 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 ORAI3Q9BRQ5 295 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 NAA15Q9BXJ9 866 aaKnown RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 TMEM121BQ9BXQ6 578 aaPredicted RBP17.85■□□□□ 0.45
LITAF-211ENST00000572255 NEUROG2Q9H2A3 272 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 PIGVQ9NUD9 493 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 RRN3Q9NYV6 651 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.85■□□□□ 0.45
LITAF-211ENST00000572255 ADAMTS1Q9UHI8 967 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 KLK13Q9UKR3 277 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 FZD4Q9ULV1 537 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 ANKRD6Q9Y2G4 727 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 NEUROG3Q9Y4Z2 214 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 SNX11Q9Y5W9 270 aa17.85■□□□□ 0.45
LITAF-211ENST00000572255 ADH1BP00325 375 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 UCHL3P15374 230 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 VAV1P15498 845 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 TFE3P19532 575 aaPredicted RBP17.84■□□□□ 0.45
LITAF-211ENST00000572255 GABRB2P47870 512 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 RNASE9P60153 205 aaKnown RBP17.84■□□□□ 0.45
LITAF-211ENST00000572255 ELAVL3Q14576 367 aaKnown RBP17.84■□□□□ 0.45
LITAF-211ENST00000572255 TAF3Q5VWG9 929 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 NCEH1Q6PIU2 408 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 LAYNQ6UX15 382 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 C14orf80Q86SX3 495 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 AADATQ8N5Z0 425 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 OR52K2Q8NGK3 314 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 SETD7Q8WTS6 366 aaKnown RBP17.84■□□□□ 0.45
LITAF-211ENST00000572255 GATA6Q92908 595 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 C18orf8Q96DM3 657 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 ALG14Q96F25 216 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 SIK2Q9H0K1 926 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 LMBRD1Q9NUN5 540 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 TAB2Q9NYJ8 693 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 PCOLCE2Q9UKZ9 415 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 STAP1Q9ULZ2 295 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 CABIN1Q9Y6J0 2220 aa17.84■□□□□ 0.45
LITAF-211ENST00000572255 TP53BP1Q12888 1972 aaPredicted RBP17.84■□□□□ 0.45
LITAF-211ENST00000572255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.83■□□□□ 0.44
LITAF-211ENST00000572255 FAM170AA1A519 330 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 LRRC72A6NJI9 287 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 CBFA2T3O75081 653 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 CLDN11O75508 207 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 ADCY5O95622 1261 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 IL1BP01584 269 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 C5AR1P21730 350 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 SCNN1AP37088 669 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 CXCR3P49682 368 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 SULT1E1P49888 294 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 ZNF177Q13360 481 aaPredicted RBP17.83■□□□□ 0.44
LITAF-211ENST00000572255 C5orf22Q49AR2 442 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 FAM102AQ5T9C2 384 aaPredicted RBP17.83■□□□□ 0.44
LITAF-211ENST00000572255 RAB44Q7Z6P3 723 aaPredicted RBP17.83■□□□□ 0.44
LITAF-211ENST00000572255 NOP9Q86U38 636 aaKnown RBP17.83■□□□□ 0.44
LITAF-211ENST00000572255 ERICH1Q86X53 443 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 XYLT1Q86Y38 959 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 CHCHD4Q8N4Q1 142 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 OR2T34Q8NGX1 318 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 FRS2Q8WU20 508 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 NT5C3BQ969T7 300 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 PPP1R9BQ96SB3 815 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 FEM1AQ9BSK4 669 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 STK33Q9BYT3 514 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 SLC25A13Q9UJS0 675 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 PCDHGB2Q9Y5G2 931 aa17.83■□□□□ 0.44
LITAF-211ENST00000572255 A0A1W2PPC4 97 aa17.82■□□□□ 0.44
LITAF-211ENST00000572255 F8VZ95 297 aa17.82■□□□□ 0.44
LITAF-211ENST00000572255 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms