RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 RNF139Q8WU17 664 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 DLG3Q92796 817 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 NMD3Q96D46 503 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 SNX25Q9H3E2 840 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 RAP2CQ9Y3L5 183 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SLCO1B7G3V0H7 640 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 SLC22A2O15244 555 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DENRO43583 198 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 STRNO43815 780 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 TNFAIP8O95379 198 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 HADHAP40939 763 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 CSE1LP55060 971 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 AMHR2Q16671 573 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DCAF4L1Q3SXM0 396 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ADCY4Q8NFM4 1077 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 URGCPQ8TCY9 931 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 EZH1Q92800 747 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 CDRT15Q96T59 188 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 EPAS1Q99814 870 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PRDM12Q9H4Q4 367 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ATXN10Q9UBB4 475 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 CDYLQ9Y232 598 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MFHAS1Q9Y4C4 1052 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ARHGAP10A1A4S6 786 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 H3BNX3 289 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ATP9BO43861 1147 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PGM3O95394 542 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 SLC25A27O95847 323 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ADSLP30566 484 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PRKAA1Q13131 559 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MPP3Q13368 585 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 SOWAHAQ2M3V2 549 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 TMC7Q7Z402 723 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 FBXO16Q8IX29 292 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PYROXD2Q8N2H3 581 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 OR52K1Q8NGK4 314 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 RDH11Q8TC12 318 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 CLEC4CQ8WTT0 213 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 HSFY1Q96LI6 401 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MRPS26Q9BYN8 205 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ZCWPW1Q9H0M4 648 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 CLIC5Q9NZA1 410 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PTTG2Q9NZH5 202 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 EPS15L1Q9UBC2 864 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 VTI1BQ9UEU0 232 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 FZD10Q9ULW2 581 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 STAP1Q9ULZ2 295 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 TBC1D30Q9Y2I9 924 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MYO18AQ92614 2054 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 SYNJ2BP-COX16A0A087WUM0 186 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PGK2P07205 417 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 GRM5P41594 1212 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MATKP42679 507 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 RPL14P50914 215 aaKnown RBP10.99□□□□□ -0.65
CCDC40-207ENST00000572253 TREML2Q5T2D2 321 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 FSTL4Q6MZW2 842 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DSELQ8IZU8 1212 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF567Q8N184 647 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DDI1Q8WTU0 396 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 COPS5Q92905 334 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ISL2Q96A47 359 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 MPP4Q96JB8 637 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 TASP1Q9H6P5 420 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 NSMCE4AQ9NXX6 385 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 PLK2Q9NYY3 685 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 COX16Q9P0S2 106 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 GTF2IRD1Q9UHL9 959 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ANKRD6Q9Y2G4 727 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 DERAQ9Y315 318 aa10.99□□□□□ -0.65
CCDC40-207ENST00000572253 ANK1P16157 1881 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 MAGEB16A2A368 324 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 EEF2KO00418 725 aaKnown RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 VTNP04004 478 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PRKCGP05129 697 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 C2P06681 752 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ENO3P13929 434 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 MRPS22P82650 360 aaKnown RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 SNAPC2Q13487 334 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ADGRE1Q14246 886 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 LRRC52Q8N7C0 313 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 OR52B2Q96RD2 323 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 C11orf84Q9BUA3 381 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 MAGEB5Q9BZ81 275 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 EFCAB1Q9HAE3 211 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 C20orf96Q9NUD7 363 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 TMCO1Q9UM00 188 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 SRGAP2BP0DMP2 458 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 GLDCP23378 1020 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ARRB2P32121 409 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PPARGP37231 505 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 MAGEA12P43365 314 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 SLC25A52Q3SY17 297 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 TMEM259Q4ZIN3 620 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ITPRIPL1Q6GPH6 555 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 B3GNT6Q6ZMB0 384 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 DEFB106AQ8N104 65 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PLD6Q8N2A8 252 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms