RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 ERLEC1Q96DZ1 483 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 TMA16Q96EY4 203 aaKnown RBP8.96□□□□□ -0.98
SMG6-210ENST00000572205 PEBP4Q96S96 227 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 TKTL2Q9H0I9 626 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 MTG2Q9H4K7 406 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 COX16Q9P0S2 106 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 ARHGAP20Q9P2F6 1191 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 VANGL2Q9ULK5 521 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 CAPN11Q9UMQ6 739 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 TBC1D30Q9Y2I9 924 aa8.96□□□□□ -0.98
SMG6-210ENST00000572205 SPTBN2O15020 2390 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 ASCC3Q8N3C0 2202 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 SIGLEC16A6NMB1 481 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 F5H5T6 163 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 RNF103O00237 685 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 NPC1O15118 1278 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CD160O95971 181 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SERPINC1P01008 464 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CYBBP04839 570 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 DLDP09622 509 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 FBXO45P0C2W1 286 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SKILP12757 684 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 NSFP46459 744 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 STK19P49842 368 aaPredicted RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 UBASH3AP57075 661 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 RNASE9P60153 205 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 TBX2Q13207 712 aaPredicted RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 MAMLD1Q13495 774 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SIM2Q14190 667 aaPredicted RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 ASIC2Q16515 512 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 TTC39BQ5VTQ0 682 aaPredicted RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 ACAD10Q6JQN1 1059 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CACNA2D4Q7Z3S7 1137 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 TRMT11Q7Z4G4 463 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 GAS2L3Q86XJ1 694 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 VSTM4Q8IW00 320 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CHPFQ8IZ52 775 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 ATP6V0D2Q8N8Y2 350 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 FRS2Q8WU20 508 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 HMGB4Q8WW32 186 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 RUBCNQ92622 972 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SYN2Q92777 582 aaPredicted RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 NTAN1Q96AB6 310 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 C1orf74Q96LT6 269 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 MCEEQ96PE7 176 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 DNAJC7Q99615 494 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 ISCUQ9H1K1 167 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 NOL6Q9H6R4 1146 aaKnown RBP8.95□□□□□ -0.98
SMG6-210ENST00000572205 SYNCQ9H7C4 482 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 RXFP3Q9NSD7 469 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 ADAM22Q9P0K1 906 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 STIM2Q9P246 746 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 STAP1Q9ULZ2 295 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SLCO1B1Q9Y6L6 691 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 LRP4O75096 1905 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 SHROOM3Q8TF72 1996 aa8.95□□□□□ -0.98
SMG6-210ENST00000572205 CNOT1A5YKK6 2376 aaKnown RBP8.94□□□□□ -0.98
SMG6-210ENST00000572205 A0A087X0T9 212 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 E9PAM4 449 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 ZNF821O75541 412 aaPredicted RBP8.94□□□□□ -0.98
SMG6-210ENST00000572205 ZMPSTE24O75844 475 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 CALB1P05937 261 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 RETP07949 1114 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 FAM228BP0C875 321 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 SLC2A3P11169 496 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 GZMAP12544 262 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 VAV1P15498 845 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 TCF4P15884 667 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 PTGER3P43115 390 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 NUMBP49757 651 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 ZNF143P52747 638 aaPredicted RBP8.94□□□□□ -0.98
SMG6-210ENST00000572205 ZBED6P86452 979 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 ATP11AP98196 1134 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 DEUP1Q05D60 604 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 PREPLQ4J6C6 727 aaPredicted RBP8.94□□□□□ -0.98
SMG6-210ENST00000572205 SFMBT2Q5VUG0 894 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 DAB2IPQ5VWQ8 1189 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 SARM1Q6SZW1 724 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 SLC41A1Q8IVJ1 513 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 CARNMT1Q8N4J0 409 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 KDM1BQ8NB78 822 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 FAM172AQ8WUF8 416 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 ARHGEF26Q96DR7 871 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 VCPIP1Q96JH7 1222 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 HAPLN3Q96S86 360 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 ORAI3Q9BRQ5 295 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 CIPCQ9C0C6 399 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 TSPY26PQ9H489 355 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 SMOC1Q9H4F8 434 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 PRSS16Q9NQE7 514 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 MPP6Q9NZW5 540 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 SERGEFQ9UGK8 458 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 NOVA2Q9UNW9 492 aaKnown RBP8.94□□□□□ -0.98
SMG6-210ENST00000572205 INVSQ9Y283 1065 aa8.94□□□□□ -0.98
SMG6-210ENST00000572205 A0A0D9SEW6 157 aa8.93□□□□□ -0.98
SMG6-210ENST00000572205 TMEM191CA6NGB0 347 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms