RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SOBPA7XYQ1 873 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 HTRA2O43464 458 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 FUCA1P04066 466 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 INHBBP09529 407 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 OCM2P0CE71 109 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 OCMP0CE72 109 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 GABRB3P28472 473 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 RPS6P62753 249 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 C15orf59Q2T9L4 293 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 SMYD5Q6GMV2 418 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 FAM156AQ8NDB6 213 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ITPKCQ96DU7 683 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 DOCK5Q9H7D0 1870 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 CDC14AQ9UNH5 594 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 PTPRFP10586 1907 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 KIAA1217Q5T5P2 1943 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 E2F8A0AVK6 867 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 C9IYK1 514 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 HDAC3O15379 428 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 FOXD2O60548 495 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 CSPG5O95196 566 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ATE1O95260 518 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 TCN1P20061 433 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 MPSTP25325 297 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 NAMPTP43490 491 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 CRADDP78560 199 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ZNF699Q32M78 642 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 MTERF2Q49AM1 385 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 CMC1Q7Z7K0 106 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 DEPTORQ8TB45 409 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 TBC1D15Q8TC07 691 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ADAM32Q8TC27 787 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 NEURL2Q9BR09 285 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ILKAPQ9H0C8 392 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 ZBTB26Q9HCK0 441 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 GPATCH2LQ9NWQ4 482 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 TRIM13O60858 407 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 H2AFYO75367 372 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 MLNP12872 115 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 ZNF24P17028 368 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 FGFR3P22607 806 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 MTX3Q5HYI7 312 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 LYSMD3Q7Z3D4 306 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 CCDC60Q8IWA6 550 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 CNTD1Q8N815 330 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 RXFP2Q8WXD0 754 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 STON2Q8WXE9 905 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 PPP1R10Q96QC0 940 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 UHRF1Q96T88 793 aaPredicted RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 DOK1Q99704 481 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 XYLT2Q9H1B5 865 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 DUS2Q9NX74 493 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 SUCOQ9UBS9 1254 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 PTBP2Q9UKA9 531 aaKnown RBP17.17■□□□□ 0.34
LITAF-209ENST00000571688 TMED5Q9Y3A6 229 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 AFG3L2Q9Y4W6 797 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 TMX2-CTNND1H3BSU7 103 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 PSAPP07602 524 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
LITAF-209ENST00000571688 GARSP41250 739 aaKnown RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 C21orf59P57076 290 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 KCNC4Q03721 635 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 PTK2BQ14289 1009 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 NHSL2Q5HYW2 709 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 SEL1L3Q68CR1 1132 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 CPNE9Q8IYJ1 553 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 CENPSQ8N2Z9 138 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 DDHD1Q8NEL9 900 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 THAP11Q96EK4 314 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 RMDN3Q96TC7 470 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 GATA5Q9BWX5 397 aaPredicted RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 RPF2Q9H7B2 306 aaKnown RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 ANLNQ9NQW6 1124 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 RAP2CQ9Y3L5 183 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 CHRNGP07510 517 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 PGAM1P18669 254 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 GP5P40197 560 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 PSMD8P48556 350 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 RHDQ02161 417 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 TMEM53Q6P2H8 277 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 SLC7A14Q8TBB6 771 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 TOP1MTQ969P6 601 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 SLCO4A1Q96BD0 722 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 TMA16Q96EY4 203 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms