RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SFTPCP11686 197 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 TKTL1P51854 596 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 INHBCP55103 352 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 TGIF1Q15583 401 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 SETMARQ53H47 684 aaPredicted RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 FAM133BQ5BKY9 247 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 FSCBQ5H9T9 825 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 FAM26FQ5R3K3 315 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 PM20D1Q6GTS8 502 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 TMEM145Q8NBT3 493 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 EDEM1Q92611 657 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 ARRDC3Q96B67 414 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 MYEOVQ96EZ4 313 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 MYOCQ99972 504 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 OLA1Q9NTK5 396 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 CACNA1DQ01668 2161 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 SPTBN1Q01082 2364 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 UBE4BO95155 1302 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 CPED1A4D0V7 1026 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 SCAMP1O15126 338 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZBED1O96006 694 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 VAV1P15498 845 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 CD58P19256 250 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 MLLT3P42568 568 aaPredicted RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 CDKN3Q16667 212 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZNF394Q53GI3 561 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZNF542PQ5EBM4 170 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 PITRM1Q5JRX3 1037 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 GUSBP11Q6P575 273 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 RBM44Q6ZP01 1051 aaKnown RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 SV2AQ7L0J3 742 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 EFL1Q7Z2Z2 1120 aaKnown RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 PDILTQ8N807 584 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZNF557Q8N988 423 aaPredicted RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 RPL10LQ96L21 214 aaKnown RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 PRICKLE1Q96MT3 831 aaPredicted RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 PSMG3-AS1Q96PY0 264 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 DUSP23Q9BVJ7 150 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 IRX2Q9BZI1 471 aaPredicted RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 CYP3A43Q9HB55 503 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 EVA1BQ9NVM1 165 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 KBTBD4Q9NVX7 518 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 SARDHQ9UL12 918 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 MAN2B2Q9Y2E5 1009 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 LRRK1Q38SD2 2015 aa10.8□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 NEMP2A6NFY4 417 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 TULP2O00295 520 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC31A1O15431 190 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 IRAK2O43187 625 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC7A4O43246 635 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 RNGTTO60942 597 aaKnown RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 PPFIA2O75334 1257 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 ITGA2BP08514 1039 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 PRLRP16471 622 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC5A2P31639 672 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 STK19P49842 368 aaPredicted RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 PDX1P52945 283 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 RPS24P62847 133 aaKnown RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 ECT2LQ008S8 904 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 CNTN1Q12860 1018 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZNF177Q13360 481 aaPredicted RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 ELAVL3Q14576 367 aaKnown RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 TBR1Q16650 682 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 C1orf220Q5T0J3 134 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 AGBL4Q5VU57 503 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 BSPRYQ5W0U4 402 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 NADSYN1Q6IA69 706 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 CRTC1Q6UUV9 634 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC22A18ASQ8N1D0 253 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 CARNMT1Q8N4J0 409 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 OR13H1Q8NG92 308 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 KLK6Q92876 244 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 HEXIM2Q96MH2 286 aaKnown RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 NOX5Q96PH1 765 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 CALN1Q9BXU9 219 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 FZD3Q9NPG1 666 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 CGNQ9P2M7 1197 aaKnown RBP10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 PAXBP1Q9Y5B6 917 aa10.79□□□□□ -0.68
CTDNEP1-202ENST00000570380 UNC13CQ8NB66 2214 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 CCDC187A0A096LP49 1063 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 EME2A4GXA9 379 aaPredicted RBP10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 YJEFN3A6XGL0 299 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 E7ENQ6 273 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 ACSL4O60488 711 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 TCEA3O75764 348 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 IGLV3-27P01718 113 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 PIK3CAP42336 1068 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 TAS2R38P59533 333 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 IGFBP7Q16270 282 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 PERM1Q5SV97 790 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms