RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 MAML1Q92585 1016 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 EXOC4Q96A65 974 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 PPP1R2P1Q96PQ5 205 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 IL12RB2Q99665 862 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
NPLOC4-203ENST00000570300 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TRAV19A0A0A6YYK7 116 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 H0YGN5 161 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 RNF103O00237 685 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MATN3O15232 486 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MAFKO60675 156 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MOSPD3O75425 235 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CLDN11O75508 207 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MBL2P11226 248 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 EPCAMP16422 314 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TSHRP16473 764 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 GGCXP38435 758 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 VPS41P49754 854 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 PMS2P54278 862 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CDH4P55283 916 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 EIF3BP55884 814 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 AP1B1Q10567 949 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TEX44Q53QW1 395 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 ANKRD20A2Q5SQ80 823 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MPP7Q5T2T1 576 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 ANKRD20A1Q5TYW2 823 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 ANKRD20A3Q5VUR7 823 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 RAP1GAP2Q684P5 730 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 ZNF783Q6ZMS7 281 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CHSY1Q86X52 802 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CPXM2Q8N436 756 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 CCNYQ8ND76 341 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TEKT5Q96M29 485 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TMEM109Q9BVC6 243 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MED4Q9NPJ6 270 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 GKN1Q9NS71 199 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 AGO1Q9UL18 857 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 TBC1D30Q9Y2I9 924 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
NPLOC4-203ENST00000570300 A0A1B0GVM2 712 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 GOLGA6BA6NDN3 693 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 TCAF2A6NFQ2 919 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ZNF197O14709 1029 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CCL16O15467 120 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CNTN5O94779 1100 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 MAP3K6O95382 1288 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 TTC4O95801 387 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 HMBSP08397 361 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ABHD2P08910 425 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 MLNP12872 115 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 PTPN3P26045 913 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 SLC6A4P31645 630 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CHKAP35790 457 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 PBX2P40425 430 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 MAGEA3P43357 314 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ARL4CP56559 192 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 GPS2Q13227 327 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 HNRNPDQ14103 355 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 HIF1AQ16665 826 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ALFQ53S48 1182 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ITPRIPL1Q6GPH6 555 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ARHGEF18Q6ZSZ5 1173 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CROCCP2Q86T23 111 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 SETD3Q86TU7 594 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 DENND1CQ8IV53 801 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ZNF567Q8N184 647 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ATPAF2Q8N5M1 289 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ARL14EPQ8N8R7 260 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 SHKBP1Q8TBC3 707 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CCDC110Q8TBZ0 833 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 LRRC39Q96DD0 335 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 GDAP1L1Q96MZ0 367 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 TTC25Q96NG3 672 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 SLC22A12Q96S37 553 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 RBM15Q96T37 977 aaKnown RBP eCLIP11.26□□□□□ -0.613e-7■■■■□ 26.7
NPLOC4-203ENST00000570300 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
NPLOC4-203ENST00000570300 SLC46A2Q9BY10 475 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms