RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NOTCH2Q04721 2471 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 LRRIQ3A6PVS8 624 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 K7ESM1 405 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 VNN1O95497 513 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 KRT10P13645 584 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 PIK3CAP42336 1068 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 ASPAP45381 313 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 CASP4P49662 377 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 TKTL1P51854 596 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 OXCT1P55809 520 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 PPP2CBP62714 309 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 PPP2CAP67775 309 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 SLC12A1Q13621 1099 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 KNOP1Q1ED39 458 aaKnown RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 CNNM4Q6P4Q7 775 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 FOXR1Q6PIV2 292 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 ZC3H3Q8IXZ2 948 aaKnown RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 STK40Q8N2I9 435 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 FAM26EQ8N5C1 309 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 ANKRD52Q8NB46 1076 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 TMEM145Q8NBT3 493 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 TMEM174Q8WUU8 243 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 OR8D1Q8WZ84 308 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 NAT6Q93015 286 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 FAM131CQ96AQ9 280 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 PRR11Q96HE9 360 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 MRGPRX3Q96LB0 322 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 STRADBQ9C0K7 418 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 MTG2Q9H4K7 406 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 LRRC4Q9HBW1 653 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 UCKL1Q9NWZ5 548 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 STIM2Q9P246 746 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 HMGXB4Q9UGU5 601 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 FBXO2Q9UK22 296 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 ACSL6Q9UKU0 697 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 FARP1Q9Y4F1 1045 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.97□□□□□ -0.97
SMG1-216ENST00000569122 CKAP5Q14008 2032 aa8.97□□□□□ -0.97
SMG1-216ENST00000569122 MYO9AB2RTY4 2548 aa8.96□□□□□ -0.97
SMG1-216ENST00000569122 CPED1A4D0V7 1026 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 EME2A4GXA9 379 aaPredicted RBP8.96□□□□□ -0.98
SMG1-216ENST00000569122 TTC34A8MYJ7 566 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 TPP1O14773 563 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 ALOX15BO15296 676 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 EFSO43281 561 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 ACSL4O60488 711 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 FAM87AP0C7U9 286 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 ZNF18P17022 549 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 TGM2P21980 687 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 HNRNPA2B1P22626 353 aaKnown RBP8.96□□□□□ -0.98
SMG1-216ENST00000569122 DRD3P35462 400 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 MORC3Q14149 939 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 NR0B2Q15466 257 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 MANEAQ5SRI9 462 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 BSPRYQ5W0U4 402 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 SV2AQ7L0J3 742 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 EFL1Q7Z2Z2 1120 aaKnown RBP8.96□□□□□ -0.98
SMG1-216ENST00000569122 PIGZQ86VD9 579 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 SLC9A9Q8IVB4 645 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 NELFCDQ8IXH7 590 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 CARNMT1Q8N4J0 409 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 BTN2A2Q8WVV5 523 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 KCTD13Q8WZ19 329 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 LIN37Q96GY3 246 aaPredicted RBP8.96□□□□□ -0.98
SMG1-216ENST00000569122 LMLNQ96KR4 655 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 CALN1Q9BXU9 219 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 PANK2Q9BZ23 570 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 LRRC4CQ9HCJ2 640 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 KBTBD4Q9NVX7 518 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 DNAJC28Q9NX36 388 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 SMC3Q9UQE7 1217 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 FRMD4BQ9Y2L6 1034 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 PAXBP1Q9Y5B6 917 aa8.96□□□□□ -0.98
SMG1-216ENST00000569122 MORC2Q9Y6X9 1032 aaPredicted RBP8.96□□□□□ -0.98
SMG1-216ENST00000569122 NUMA1Q14980 2115 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 A6NNZ2 444 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 PLD2O14939 933 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 NVLO15381 856 aaKnown RBP8.95□□□□□ -0.98
SMG1-216ENST00000569122 SLC31A1O15431 190 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 RTN2O75298 545 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 GIMD1P0DJR0 217 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 LIPCP11150 499 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 VASPP50552 380 aaPredicted RBP8.95□□□□□ -0.98
SMG1-216ENST00000569122 NUCB2P80303 420 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 NFKB2Q00653 900 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 SPIDRQ14159 915 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 CDKN3Q16667 212 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 POM121L1PQ3SYA9 428 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 ARHGAP17Q68EM7 881 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 RFWD3Q6PCD5 774 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 UNC13DQ70J99 1090 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 ZSCAN30Q86W11 494 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 SIX6OS1Q8N1H7 587 aa8.95□□□□□ -0.98
SMG1-216ENST00000569122 FBXO39Q8N4B4 442 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms