RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TMEM8AQ9HCN3 771 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 VPS45Q9NRW7 570 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 GAR1Q9NY12 217 aaKnown RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 KLHL13Q9P2N7 655 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SCINQ9Y6U3 715 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 KDRP35968 1356 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ARFGEF2Q9Y6D5 1785 aa3.84□□□□□ -1.8
HMGB1P6-201ENST00000569046 FAM234BA2RU67 622 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 BTBD19C9JJ37 291 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 H0YIN7 160 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 UBE2Q2LH0YL09 131 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 INO80B-WBP1J3KQ70 363 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 CLIC1O00299 241 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 USP1O94782 785 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 PECAM1P16284 738 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 KELP23276 732 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ARHGAP25P42331 645 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC14A1Q13336 389 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC39A6Q13433 755 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DNASE1L3Q13609 305 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 KLF9Q13886 244 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 MFSD13AQ14CX5 517 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DAZAP2Q15038 168 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC4A8Q2Y0W8 1093 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DEFB115Q30KQ5 88 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 CERKLQ49MI3 558 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ARHGAP15Q53QZ3 475 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 FAXCQ5TGI0 409 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DENND2CQ68D51 928 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 C1QL2Q7Z5L3 287 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DPP9Q86TI2 863 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF354CQ86Y25 554 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 TXLNBQ8N3L3 684 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 KIAA1191Q96A73 305 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 VPS50Q96JG6 964 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SNX27Q96L92 541 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 CRB3Q9BUF7 120 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 RNF7Q9UBF6 113 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF69Q9UC07 566 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 NRBP1Q9UHY1 535 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 FZD4Q9ULV1 537 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 SCAF8Q9UPN6 1271 aaKnown RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 DGKBQ9Y6T7 804 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 USP42Q9H9J4 1324 aaKnown RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 RTL1A6NKG5 1358 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 FLT4P35916 1363 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 CNTNAP1P78357 1384 aa3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 KDM6AO15550 1401 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P6-201ENST00000569046 ADAMTSL1Q8N6G6 1762 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 LTBP1Q14766 1721 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF804BA4D1E1 1349 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 PASKQ96RG2 1323 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMEM232C9JQI7 657 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 FCHO1O14526 889 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TP73O15350 636 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 COQ9O75208 318 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 LDHCP07864 332 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 EGR1P18146 543 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 MAN1A1P33908 653 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 GALNSP34059 522 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TRIM14Q14142 442 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 EIF4A2Q14240 407 aaKnown RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 KCNJ12Q14500 433 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 KCNB1Q14721 858 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC5A9Q2M3M2 681 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TBC1D9BQ66K14 1250 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 MRNIPQ6NTE8 343 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 MIS18BP1Q6P0N0 1132 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF530Q6P9A1 599 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 LVRNQ6Q4G3 990 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 LDHAL6AQ6ZMR3 332 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF813Q6ZN06 617 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 FAM71DQ8N9W8 422 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC150Q8NCX0 1101 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 BRI3BPQ8WY22 251 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 C18orf8Q96DM3 657 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC138Q96M89 665 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 HS6ST2Q96MM7 605 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TESK2Q96S53 571 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 PAGR1Q9BTK6 254 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 C1QTNF7Q9BXJ2 289 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC29A3Q9BZD2 475 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 RGL1Q9NZL6 768 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 SEMA5BQ9P283 1151 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF70Q9UC06 446 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 ABT1Q9ULW3 272 aaKnown RBP3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 BTBD3Q9Y2F9 522 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 PCDHB2Q9Y5E7 798 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 PCDHGB2Q9Y5G2 931 aa3.82□□□□□ -1.8
HMGB1P6-201ENST00000569046 TAF1P21675 1872 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 RNF123Q5XPI4 1314 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF541Q9H0D2 1346 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 OR2W5A6NFC9 320 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 C16orf96A6NNT2 1141 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 KCNU1A8MYU2 1149 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms