RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 SRGAP2BP0DMP2 458 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 FOXN2P32314 431 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 MAGEA11P43364 429 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 NPY2RP49146 381 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 PITX1P78337 314 aaPredicted RBP18.12■□□□□ 0.49
NEIL1-221ENST00000569035 PPARDQ03181 441 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 WASHC5Q12768 1159 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 SLC1A5Q15758 541 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 GPRIN1Q7Z2K8 1008 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 ZNF567Q8N184 647 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 DEPDC1BQ8WUY9 529 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 C8orf48Q96LL4 319 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 SERPINB11Q96P15 392 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 TSGA13Q96PP4 275 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 CWH43Q9H720 699 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 LRRC40Q9H9A6 602 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 KIF9Q9HAQ2 790 aa18.12■□□□□ 0.49
NEIL1-221ENST00000569035 RC3H2Q9HBD1 1191 aaKnown RBP18.12■□□□□ 0.49
NEIL1-221ENST00000569035 MICAL3Q7RTP6 2002 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 IRAK2O43187 625 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 HNRNPCL1O60812 293 aaKnown RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 MAP3K6O95382 1288 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 AP2A1O95782 977 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 CCNCP24863 283 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 EPHB2P29323 1055 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 HOXC13P31276 330 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 GARSP41250 739 aaKnown RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 EIF4EBP2Q13542 120 aaPredicted RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 BTG3Q14201 252 aaPredicted RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 DQX1Q8TE96 717 aaKnown RBP18.11■□□□□ 0.49
NEIL1-221ENST00000569035 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 GBA3Q9H227 469 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 MANSC1Q9H8J5 431 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 MARCH5Q9NX47 278 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 ADAM28Q9UKQ2 775 aa18.11■□□□□ 0.49
NEIL1-221ENST00000569035 OR6C75A6NL08 312 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 TRIM49D1C9J1S8 452 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 ANKRD65E5RJM6 399 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 PTPN3P26045 913 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 GRIK1P39086 918 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 ALDH7A1P49419 539 aaKnown RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 PSEN1P49768 467 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 ELAVL2Q12926 359 aaKnown RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 ATG16L1Q676U5 607 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 NAPEPLDQ6IQ20 393 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 TIGD7Q6NT04 549 aaPredicted RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 SH2D5Q6ZV89 423 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 MON1AQ86VX9 555 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 PDCD7Q8N8D1 485 aaKnown RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 TUBB6Q9BUF5 446 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 ZCWPW1Q9H0M4 648 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 NSMCE4AQ9NXX6 385 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 TXNDC16Q9P2K2 825 aa18.1■□□□□ 0.49
NEIL1-221ENST00000569035 AAR2Q9Y312 384 aaKnown RBP18.1■□□□□ 0.49
NEIL1-221ENST00000569035 BIRC5O15392 142 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 GJB5O95377 273 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 ATP5BP06576 529 aaKnown RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CDK18Q07002 472 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 ZKSCAN8Q15776 578 aaPredicted RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 GALNTL6Q49A17 601 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CASC4Q6P4E1 433 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CCDC91Q7Z6B0 441 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CCDC117Q8IWD4 279 aaPredicted RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 AGGF1Q8N302 714 aaeCLIP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 GPR62Q9BZJ7 368 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 OLA1Q9NTK5 396 aaKnown RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 TXLNGQ9NUQ3 528 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 SEPT10Q9P0V9 454 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 FOXO6A8MYZ6 492 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 LRIG2O94898 1065 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 PSMB4P28070 264 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CRHR1P34998 444 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 ETV4P43268 484 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 RASSF2P50749 326 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 SLC5A3P53794 718 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CACNA2D1P54289 1103 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 MGAT5Q09328 741 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 KLHDC8BQ8IXV7 354 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CCDC63Q8NA47 563 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 OR10T2Q8NGX3 314 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 C1orf74Q96LT6 269 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 CEP295NLQ96MC4 621 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 ZBED2Q9BTP6 218 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 SCML2Q9UQR0 700 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 MRPL42Q9Y6G3 142 aaKnown RBP18.09■□□□□ 0.49
NEIL1-221ENST00000569035 SLC4A7Q9Y6M7 1214 aa18.09■□□□□ 0.49
NEIL1-221ENST00000569035 LAMA3Q16787 3333 aa18.08■□□□□ 0.48
NEIL1-221ENST00000569035 TNFRSF10BO14763 440 aa18.08■□□□□ 0.48
NEIL1-221ENST00000569035 PYGBP11216 843 aa18.08■□□□□ 0.48
NEIL1-221ENST00000569035 NEFHP12036 1026 aa18.08■□□□□ 0.48
NEIL1-221ENST00000569035 HADHAP40939 763 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms