RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SNIP1Q8TAD8 396 aaKnown RBP15.36■□□□□ 0.05
USB1-214ENST00000568848 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 KCTD13Q8WZ19 329 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 CNGB3Q9NQW8 809 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 TJP2Q9UDY2 1190 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 ADAMTS1Q9UHI8 967 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 CLCA2Q9UQC9 943 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 NAV2Q8IVL1 2488 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 PIEZO2Q9H5I5 2752 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 EDDM13A0A1B0GTR0 161 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 FAM170AA1A519 330 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 RRP8O43159 456 aaKnown RBP15.35■□□□□ 0.05
USB1-214ENST00000568848 BNIP3LO60238 219 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 SETSIPP0DME0 302 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 EPB41P11171 864 aaKnown RBP15.35■□□□□ 0.05
USB1-214ENST00000568848 VDRP11473 427 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 GOT1P17174 413 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 RPL13P26373 211 aaKnown RBP15.35■□□□□ 0.05
USB1-214ENST00000568848 CCR5P51681 352 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 CENPCQ03188 943 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 LY6DQ14210 128 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 E2F5Q15329 346 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 ZNF542PQ5EBM4 170 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 NUGGCQ68CJ6 796 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 NAPEPLDQ6IQ20 393 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 SND1Q7KZF4 910 aaKnown RBP eCLIP15.35■□□□□ 0.05
USB1-214ENST00000568848 GPR155Q7Z3F1 870 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 CHSY1Q86X52 802 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 SLC25A45Q8N413 288 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 FGF11Q92914 225 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 FZD4Q9ULV1 537 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
USB1-214ENST00000568848 SYNJ2BP-COX16A0A087WUM0 186 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 DFNA5O60443 496 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
USB1-214ENST00000568848 CKMT2P17540 419 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 TACR2P21452 398 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ARRB1P49407 418 aaPredicted RBP15.34■□□□□ 0.05
USB1-214ENST00000568848 ZNF445P59923 1031 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ECT2LQ008S8 904 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 CFHR1Q03591 330 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 KCNH2Q12809 1159 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 CNTN1Q12860 1018 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 PNOCQ13519 176 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 MPP7Q5T2T1 576 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ARHGAP40Q5TG30 622 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 LCLAT1Q6UWP7 414 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 KRBA2Q6ZNG9 492 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 RRAGAQ7L523 313 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ARHGEF19Q8IW93 802 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 SLC39A13Q96H72 371 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 NOX5Q96PH1 765 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 NRSN2Q9GZP1 204 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 OSBPL2Q9H1P3 480 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 COX16Q9P0S2 106 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 ZDHHC9Q9Y397 364 aa15.34■□□□□ 0.05
USB1-214ENST00000568848 E9PAM4 449 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 SLC31A1O15431 190 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 LATO43561 262 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 MT-CO3P00414 261 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 ASLP04424 464 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 C5AR1P21730 350 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 PRCPP42785 496 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 CLDN2P57739 230 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 TAF5Q15542 800 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 KIF26BQ2KJY2 2108 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 TBC1D25Q3MII6 688 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 AGBL4Q5VU57 503 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 ANKRD40Q6AI12 368 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 Q6ZVU0 165 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 UNC45BQ8IWX7 931 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 DCBLD1Q8N8Z6 715 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 FRS2Q8WU20 508 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 BAP1Q92560 729 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 LGMNQ99538 433 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 ST7Q9NRC1 585 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 SCML1Q9UN30 329 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 ITIH6Q6UXX5 1313 aa15.33■□□□□ 0.04
USB1-214ENST00000568848 COL6A6A6NMZ7 2263 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 A0A1B0GVM2 712 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 A0A1W2PNU3 283 aaPredicted RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 CETN3O15182 167 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 IRAK2O43187 625 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 NEBLO76041 1014 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 GIMD1P0DJR0 217 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 RXRGP48443 463 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 TAS2R38P59533 333 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 MCCD1P59942 119 aaPredicted RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 DAB2P98082 770 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 TAF1BQ53T94 588 aaPredicted RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 RNF219Q5W0B1 726 aaPredicted RBP15.32■□□□□ 0.04
USB1-214ENST00000568848 CRTC1Q6UUV9 634 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms