RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 VDRP11473 427 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 MAT2AP31153 395 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 NNMTP40261 264 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 ERVPABLB-1P60509 514 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 YWHAEP62258 255 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 GABREP78334 506 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 ADAM9Q13443 819 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 CUL2Q13617 745 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 MS4A13Q5J8X5 152 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 ARHGAP40Q5TG30 622 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 OR4C6Q8NH72 309 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 KCNE4Q8WWG9 221 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 PTPRN2Q92932 1015 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 FAM131CQ96AQ9 280 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 MYEOVQ96EZ4 313 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 SERPINB11Q96P15 392 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 DEPDC7Q96QD5 511 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 SPAG5Q96R06 1193 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 NUCKS1Q9H1E3 243 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 SLCO3A1Q9UIG8 710 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 B8ZZF3 427 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 PRAMEF26H0Y7S4 382 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 PLRG1O43660 514 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 RHOBTB3O94955 611 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 LTFP02788 710 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 C6P13671 934 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 RGS7P49802 495 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 NNTQ13423 1086 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 SETMARQ53H47 684 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 DCAF6Q58WW2 860 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 CDCP2Q5VXM1 449 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 ATL3Q6DD88 541 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 DSG4Q86SJ6 1040 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 CFAP52Q8N1V2 620 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC25A45Q8N413 288 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 GUF1Q8N442 669 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 FAM181AQ8N9Y4 354 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC35F5Q8WV83 523 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 EEF2KMTQ96G04 330 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 RPL10LQ96L21 214 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 FCRL2Q96LA5 508 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 SEMA4CQ9C0C4 833 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 THSD1Q9NS62 852 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 KIAA1257Q9ULG3 409 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 TLR6Q9Y2C9 796 aa12.19□□□□□ -0.46
GTF3C1-209ENST00000568569 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 PIK3R2O00459 728 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 KLK10O43240 276 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 OPA1O60313 960 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 RTN2O75298 545 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 USP12O75317 370 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 MOCS2O96007 188 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 ALPPL2P10696 532 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 CKMT1AP12532 417 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 VAV1P15498 845 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 DGKAP23743 735 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 LSSP48449 732 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 SULT2A1Q06520 285 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 FAM46CQ5VWP2 391 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 LCLAT1Q6UWP7 414 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 APCDD1Q8J025 514 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 SNRNP27Q8WVK2 155 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 OR8D1Q8WZ84 308 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 TTC9Q92623 222 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 KLHDC7BQ96G42 594 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC39A13Q96H72 371 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 DPH1Q9BZG8 443 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 POLR1BQ9H9Y6 1135 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 KLHL11Q9NVR0 708 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 TJP2Q9UDY2 1190 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 CFAP45Q9UL16 551 aa12.18□□□□□ -0.46
GTF3C1-209ENST00000568569 MYLKQ15746 1914 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 A0A1B0GVM2 712 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 C1QTNF3-AMACRE9PGA6 284 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 FFAR2O15552 330 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CSO75390 466 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 GABBR2O75899 941 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 FBXO21O94952 628 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 GP1BAP07359 652 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 PFKFB1P16118 471 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms