RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PGLYRP2Q96PD5 576 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 TTLL2Q9BWV7 592 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 CATSPERBQ9H7T0 1116 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 FETUBQ9UGM5 382 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 AFF4Q9UHB7 1163 aaKnown RBP15.02■□□□□ -0
COMMD4-221ENST00000567935 SLC12A6Q9UHW9 1150 aa15.02■□□□□ -0
COMMD4-221ENST00000567935 XPO7Q9UIA9 1087 aaKnown RBP15.02■□□□□ -0
COMMD4-221ENST00000567935 WDR87Q6ZQQ6 2873 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 NT5C1B-RDH14C9J2C7 533 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 LRIG2O94898 1065 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SHBGP04278 402 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 ARPP19P56211 112 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 IFRD2Q12894 506 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 PDIA2Q13087 525 aaKnown RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SEMA5AQ13591 1074 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 RASA2Q15283 850 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 DNAJC21Q5F1R6 531 aaKnown RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SPOUT1Q5T280 376 aaKnown RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 RNF19BQ6ZMZ0 732 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 ARHGEF18Q6ZSZ5 1173 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 TMEM173Q86WV6 379 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 LRRC49Q8IUZ0 686 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 CNPY4Q8N129 248 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SLC39A11Q8N1S5 342 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 VN1R2Q8NFZ6 395 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 BCL7CQ8WUZ0 217 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 CASP10Q92851 521 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 HDAC11Q96DB2 347 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SLC39A13Q96H72 371 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 VAT1Q99536 393 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SEPT5Q99719 369 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 CENPHQ9H3R5 247 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 CNOT10Q9H9A5 744 aaKnown RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 NMUR1Q9HB89 426 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 EIF2B3Q9NR50 452 aaKnown RBP15.01□□□□□ -0.01
COMMD4-221ENST00000567935 SPG21Q9NZD8 308 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 CDY1Q9Y6F8 540 aa15.01□□□□□ -0.01
COMMD4-221ENST00000567935 ZNF638Q14966 1978 aaKnown RBP15□□□□□ -0.01
COMMD4-221ENST00000567935 GREB1Q4ZG55 1949 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 KCNU1A8MYU2 1149 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 E7EVH7 732 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 CDH16O75309 829 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 APOEP02649 317 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 GSTA2P09210 222 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 ZDHHC11BP0C7U3 371 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 EPHB2P29323 1055 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 DSG1Q02413 1049 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 RING1Q06587 406 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 PPIDQ08752 370 aaKnown RBP15□□□□□ -0.01
COMMD4-221ENST00000567935 GALNT2Q10471 571 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 NR1H3Q13133 447 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 TRIP4Q15650 581 aaPredicted RBP15□□□□□ -0.01
COMMD4-221ENST00000567935 CCDC38Q502W7 563 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 TNFAIP8L3Q5GJ75 292 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 MANEALQ5VSG8 457 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 CWF19L1Q69YN2 538 aaKnown RBP15□□□□□ -0.01
COMMD4-221ENST00000567935 TAOK1Q7L7X3 1001 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 TDRPQ86YL5 185 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 ATP6V0D2Q8N8Y2 350 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 SPPL3Q8TCT6 385 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 PYROXD1Q8WU10 500 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 TBC1D31Q96DN5 1066 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 MAGEB5Q9BZ81 275 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 XAB2Q9HCS7 855 aaKnown RBP15□□□□□ -0.01
COMMD4-221ENST00000567935 GMIPQ9P107 970 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 HCSTQ9UBK5 93 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 LGALS13Q9UHV8 139 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 TRHDEQ9UKU6 1024 aa15□□□□□ -0.01
COMMD4-221ENST00000567935 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 WASH4PA8MWX3 477 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 FAM72CH0Y354 149 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 SHOX2O60902 331 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 PAGE1O75459 146 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 TMEM63AO94886 807 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 MLNP12872 115 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 GPR15P49685 360 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 TBX4P57082 545 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 PPP2R2AP63151 447 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 DUSP4Q13115 394 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 BTG3Q14201 252 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 ANGPT1Q15389 498 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 PARP6Q2NL67 630 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 FAM72AQ5TYM5 149 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 ANKRD22Q5VYY1 191 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 KCTD16Q68DU8 428 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 FAM72DQ6L9T8 149 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 TAS1R1Q7RTX1 841 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 FAM72BQ86X60 149 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 UBALD2Q8IYN6 164 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 ZBED8Q8IZ13 594 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 B3GALT6Q96L58 329 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 C9orf72Q96LT7 481 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms