RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 OMDQ99983 421 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 PIGVQ9NUD9 493 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 MUC22E2RYF6 1773 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-208ENST00000567843 KMT2BQ9UMN6 2715 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 CNTN5O94779 1100 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 GFPT2O94808 682 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 IL1BP01584 269 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 SRPRAP08240 638 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 MMEP08473 750 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC2A3P11169 496 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC8A1P32418 973 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 MATKP42679 507 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 GALCP54803 685 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 TRIP6Q15654 476 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 KCNT1Q5JUK3 1230 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NAA35Q5VZE5 725 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 KIAA0895LQ68EN5 471 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NCEH1Q6PIU2 408 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NAXDQ8IW45 347 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 PTPRN2Q92932 1015 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 C18orf8Q96DM3 657 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NPY6RQ99463 290 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NAA15Q9BXJ9 866 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 KLK13Q9UKR3 277 aa12.59□□□□□ -0.39
GTF3C1-208ENST00000567843 AKAP13Q12802 2813 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 UPK3BL1B0FP48 263 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 UPK3BL2E5RIL1 263 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 F8VZ95 297 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 SNAP91O60641 907 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ZNF18P17022 549 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 CD27P26842 260 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 FLT3P36888 993 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 NNMTP40261 264 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 AFF3P51826 1226 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 SNX16P57768 344 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 IL9RQ01113 521 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 KRT31Q15323 416 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ALFQ53S48 1182 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 TRNP1Q6NT89 227 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 XYLT1Q86Y38 959 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 AADATQ8N5Z0 425 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 EMC1Q8N766 993 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ZNF397Q8NF99 534 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ALG14Q96F25 216 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 SLC6A18Q96N87 628 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ORAI3Q9BRQ5 295 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 STK33Q9BYT3 514 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ZDHHC5Q9C0B5 715 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 WDCPQ9H6R7 721 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 EBF2Q9HAK2 575 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 FANCLQ9NW38 375 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 MPP6Q9NZW5 540 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 VPS28Q9UK41 221 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 ANKRD6Q9Y2G4 727 aa12.58□□□□□ -0.4
GTF3C1-208ENST00000567843 WNT9AO14904 365 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 EPHB6O15197 1021 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 GJB6O95452 261 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 CER1O95813 267 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 CXCR3P49682 368 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 TEAD4Q15561 434 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 DLG2Q15700 870 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 CCDC157Q569K6 752 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 TTC39BQ5VTQ0 682 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 Q6ZVU0 165 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 TFAP2DQ7Z6R9 452 aa12.57□□□□□ -0.4
GTF3C1-208ENST00000567843 KDM1BQ8NB78 822 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms