RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 TTC7AQ9ULT0 858 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GIT1Q9Y2X7 761 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SH3BP1Q9Y3L3 701 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 MYH1P12882 1939 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 LRRC37A2A6NM11 1700 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ASTN1O14525 1302 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ATXN2Q99700 1313 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 A0A087X0T9 212 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 UBE2QL1A1L167 161 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ARHGEF35A5YM69 484 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 MIF4GDA9UHW6 222 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 HMGB1P1B2RPK0 211 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 PGRMC1O00264 195 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF185O15231 689 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SHOX2O60902 331 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 PPFIA4O75335 1185 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 AKAP3O75969 853 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ERLIN2O94905 339 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SLITRK3O94933 977 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 LYPLA2O95372 231 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 LY86O95711 162 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 GGPS1O95749 300 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SYF2O95926 243 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 TIMP1P01033 207 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 GH2P01242 217 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 FAM228BP0C875 321 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 KRT13P13646 458 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 KLRC1P26715 233 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SFNP31947 248 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 HADHBP55084 474 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 HNRNPH2P55795 449 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 BACE1P56817 501 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ZXDAP98168 799 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CD69Q07108 199 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 C2orf54Q08AI8 447 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SPP2Q13103 211 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 GRB14Q14449 540 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CCL14Q16627 93 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 USP39Q53GS9 565 aaKnown RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 DCAF17Q5H9S7 520 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 EGFLAMQ63HQ2 1017 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 MFSD5Q6N075 450 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 PPP1R2P3Q6NXS1 205 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 XRRA1Q6P2D8 792 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 NFRKBQ6P4R8 1299 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CRIP3Q6Q6R5 217 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 FAM111BQ6SJ93 734 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 C1orf186Q6ZWK4 172 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF720Q7Z2F6 126 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 PEX26Q7Z412 305 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 IRF2BP2Q7Z5L9 587 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SLFN11Q7Z7L1 901 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 SLC41A1Q8IVJ1 513 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 RHOT2Q8IXI1 618 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 EFCAB13Q8IY85 973 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 FAM186BQ8IYM0 893 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CMTM4Q8IZR5 234 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 TMEM199Q8N511 208 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 MYCT1Q8N699 235 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 FAM133AQ8N9E0 248 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CLRN3Q8NCR9 226 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 C3orf20Q8ND61 904 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 OR14C36Q8NHC7 312 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CTNNBL1Q8WYA6 563 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 RFFLQ8WZ73 363 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 HVCN1Q96D96 273 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ACAP3Q96P50 834 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-217ENST00000567817 RAB17Q9H0T7 212 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ISCUQ9H1K1 167 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 CARD9Q9H257 536 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 VPS11Q9H270 941 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 C17orf75Q9HAS0 396 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 TBC1D22BQ9NU19 505 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 GCNT4Q9P109 453 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 PRSS50Q9UI38 385 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 NENFQ9UMX5 172 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 EXOC7Q9UPT5 735 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 MYO9BQ13459 2157 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF236Q9UL36 1845 aa5.6□□□□□ -1.51
CAPN3-217ENST00000567817 ANKRD62A6NC57 917 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 F8VZ95 297 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 H0YCG3 227 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 TULP2O00295 520 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 WDR46O15213 610 aaKnown RBP5.59□□□□□ -1.51
CAPN3-217ENST00000567817 TGFB1I1O43294 461 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 BUB1O43683 1085 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 STRNO43815 780 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 HEXIM1O94992 359 aaKnown RBP5.59□□□□□ -1.51
CAPN3-217ENST00000567817 ICAM1P05362 532 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 CLEC2LP0C7M8 214 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 MYBP10242 640 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 TACR2P21452 398 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 HSPA9P38646 679 aaKnown RBP5.59□□□□□ -1.51
CAPN3-217ENST00000567817 FMO5P49326 533 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 HSD17B4P51659 736 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 JAK3P52333 1124 aa5.59□□□□□ -1.51
CAPN3-217ENST00000567817 EIF3BP55884 814 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms