RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ANO10Q9NW15 660 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 FANCLQ9NW38 375 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 TAB2Q9NYJ8 693 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLK3-219ENST00000567805 COX16Q9P0S2 106 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 INTS6Q9UL03 887 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 STAP1Q9ULZ2 295 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 SCML1Q9UN30 329 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ERVW-1Q9UQF0 538 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 PAXBP1Q9Y5B6 917 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 ASCC3Q8N3C0 2202 aaKnown RBP4.94□□□□□ -1.62
CLK3-219ENST00000567805 NUMA1Q14980 2115 aa4.94□□□□□ -1.62
CLK3-219ENST00000567805 GON4LQ3T8J9 2241 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FREM2Q5SZK8 3169 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 LRRC10BA6NIK2 292 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 LGALS16A8MUM7 142 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 BCAT2O15382 392 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 OPHN1O60890 802 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 RNASEH1O60930 286 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 SIN3BO75182 1162 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PAGE1O75459 146 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CLDN11O75508 207 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 GFPT2O94808 682 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ADCY5O95622 1261 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SEMA4FO95754 770 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ADH1BP00325 375 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 F9P00740 461 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 MMEP08473 750 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PDGFRAP16234 1089 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 MAOBP27338 520 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PMLP29590 882 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ACSL1P33121 698 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SOX5P35711 763 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 NNMTP40261 264 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CTSOP43234 321 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 CXCR3P49682 368 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 KLK7P49862 253 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SULT1E1P49888 294 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 NOVA1P51513 510 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 PLK1P53350 603 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 COPB1P53618 953 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 CDH4P55283 916 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 JAM2P57087 298 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 RNASE9P60153 205 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 POLR2FP61218 127 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 RPS14P62263 151 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 NOMO3P69849 1222 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SHC2P98077 582 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CDR2Q01850 454 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CENPCQ03188 943 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 DEUP1Q05D60 604 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SEMA3BQ13214 749 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SLC14A1Q13336 389 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ZNF177Q13360 481 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 CST6Q15828 149 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 UAP1L1Q3KQV9 507 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SLC25A52Q3SY17 297 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 C5orf22Q49AR2 442 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CCDC183Q5T5S1 534 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 C9orf64Q5T6V5 341 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FAM102AQ5T9C2 384 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 N4BP2L1Q5TBK1 243 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 OTUD1Q5VV17 481 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 NAA35Q5VZE5 725 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CXorf57Q6NSI4 855 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 FBXL22Q6P050 247 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 LRSAM1Q6UWE0 723 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 MMS22LQ6ZRQ5 1243 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ARCQ7LC44 396 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PIP4P1Q86T03 277 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FAM124AQ86V42 546 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CIR1Q86X95 450 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 XYLT1Q86Y38 959 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 DHX40Q8IX18 779 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 HDDC3Q8N4P3 179 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 MINDY1Q8N5J2 469 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 C1orf216Q8TAB5 229 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 CPA5Q8WXQ8 436 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 IGSF8Q969P0 613 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SPAG5Q96R06 1193 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FEM1AQ9BSK4 669 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 REPIN1Q9BWE0 567 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 GTPBP2Q9BX10 602 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 ADAM33Q9BZ11 813 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 NAT10Q9H0A0 1025 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 BTBD1Q9H0C5 482 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 TKTL2Q9H0I9 626 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 SLC32A1Q9H598 525 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 C6orf106Q9H6K1 298 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 WDCPQ9H6R7 721 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SGK2Q9HBY8 427 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FSCN3Q9NQT6 498 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 FAM207AQ9NSI2 230 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 PIGVQ9NUD9 493 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms