RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 RIPPLY3P57055 190 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 CYP24A1Q07973 514 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 ARID5BQ14865 1188 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
SMG1-213ENST00000567737 MANEAQ5SRI9 462 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
SMG1-213ENST00000567737 SV2BQ7L1I2 683 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 UNC93AQ86WB7 457 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 TRIM69Q86WT6 500 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 JAMLQ86YT9 394 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 KDM1BQ8NB78 822 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 WFDC5Q8TCV5 224 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 TTC17Q96AE7 1141 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 USP3Q9Y6I4 520 aa14.29□□□□□ -0.12
SMG1-213ENST00000567737 TTC34A8MYJ7 566 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 SLFN14P0C7P3 912 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 LIPCP11150 499 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CSKP41240 450 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 MORC3Q14149 939 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CLCA4Q14CN2 919 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 ADGRF1Q5T601 910 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 GUSBP11Q6P575 273 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CRTC1Q6UUV9 634 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 MFN1Q8IWA4 741 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CALN1Q9BXU9 219 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 CCDC39Q9UFE4 941 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 ANAPC2Q9UJX6 822 aa14.28□□□□□ -0.12
SMG1-213ENST00000567737 PLD2O14939 933 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 SLC7A4O43246 635 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 PLRG1O43660 514 aaKnown RBP14.27□□□□□ -0.13
SMG1-213ENST00000567737 TBL1XO60907 577 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 RTN2O75298 545 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 NEBLO76041 1014 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 LATS1O95835 1130 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 SRPRAP08240 638 aaKnown RBP14.27□□□□□ -0.13
SMG1-213ENST00000567737 MZF1P28698 734 aaPredicted RBP14.27□□□□□ -0.13
SMG1-213ENST00000567737 DRD3P35462 400 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 SGSHP51688 502 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMG1-213ENST00000567737 NCOA4Q13772 614 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 MPP7Q5T2T1 576 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 DSG4Q86SJ6 1040 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 STK40Q8N2I9 435 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 WDR48Q8TAF3 677 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 ELMO3Q96BJ8 720 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 MYOCQ99972 504 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 SYNDIG1Q9H7V2 258 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 STOML2Q9UJZ1 356 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 ERVW-1Q9UQF0 538 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
SMG1-213ENST00000567737 FRMD3A2A2Y4 597 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 EME2A4GXA9 379 aaPredicted RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 HNRNPKP61978 463 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMG1-213ENST00000567737 CYP4F2P78329 520 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 EIF3IQ13347 325 aaKnown RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 SPIDRQ14159 915 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 ELAVL3Q14576 367 aaKnown RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 RNF219Q5W0B1 726 aaPredicted RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 TMEM145Q8NBT3 493 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 IFT43Q96FT9 208 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 OLA1Q9NTK5 396 aaKnown RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 DNAJC28Q9NX36 388 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 HBS1LQ9Y450 684 aaKnown RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 CEP83Q9Y592 693 aa14.26□□□□□ -0.13
SMG1-213ENST00000567737 COL27A1Q8IZC6 1860 aaPredicted RBP14.26□□□□□ -0.13
SMG1-213ENST00000567737 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 SLC31A1O15431 190 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 BMP15O95972 392 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 CYP2J2P51589 502 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 LSM11P83369 360 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMG1-213ENST00000567737 KCNAB2Q13303 367 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 NR0B2Q15466 257 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 ZNF542PQ5EBM4 170 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 RRAGBQ5VZM2 374 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 VASH2Q86V25 355 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 PACS2Q86VP3 889 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 CCDC117Q8IWD4 279 aaPredicted RBP14.25□□□□□ -0.13
SMG1-213ENST00000567737 CCDC65Q8IXS2 484 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 XXYLT1Q8NBI6 393 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 FIBINQ8TAL6 211 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 FAM131CQ96AQ9 280 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 EPSTI1Q96J88 318 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
SMG1-213ENST00000567737 DUSP16Q9BY84 665 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
SMG1-213ENST00000567737 CAAP1Q9H8G2 361 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 EPB41L5Q9HCM4 733 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 STIM2Q9P246 746 aa14.25□□□□□ -0.13
SMG1-213ENST00000567737 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
SMG1-213ENST00000567737 TYW5A2RUC4 315 aaKnown RBP14.24□□□□□ -0.13
SMG1-213ENST00000567737 H3BM21 787 aa14.24□□□□□ -0.13
SMG1-213ENST00000567737 MOCS3O95396 460 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms