RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 GPRASP2Q96D09 838 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZBTB45Q96K62 511 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 NOL11Q9H8H0 719 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TUBGCP4Q9UGJ1 667 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ASMTLO95671 621 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 WDR4P57081 412 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 FOXR2Q6PJQ5 311 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 UNC5AQ6ZN44 842 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ENKURQ8TC29 256 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 UGT2B28Q9BY64 529 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 WDR55Q9H6Y2 383 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TSPAN16Q9UKR8 245 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM155BO75949 473 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ICAM1P05362 532 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 GABRB2P47870 512 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TP53BP2Q13625 1128 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZDHHC24Q6UX98 284 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 BBS12Q6ZW61 710 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZNF276Q8N554 614 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 FBXO30Q8TB52 745 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 NPAS2Q99743 824 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 APOL4Q9BPW4 351 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 POLIQ9UNA4 740 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 SCAF8Q9UPN6 1271 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 PLLPQ9Y342 182 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 MATN2O00339 956 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SNAP91O60641 907 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TIPRLO75663 272 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TOMM70O94826 608 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TWF1Q12792 350 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZNF846Q147U1 533 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 CARTPTQ16568 116 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 DNAJB14Q8TBM8 379 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PTCD3Q96EY7 689 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SYNCRIPO60506 623 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 CD4P01730 458 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 MAGP20916 626 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 CRABP2P29373 138 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SOAT1P35610 550 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PGS1Q32NB8 556 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 LDLRAP1Q5SW96 308 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM45BPQ6NSW5 357 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 MPZL3Q6UWV2 235 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TBCDQ9BTW9 1192 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 OSBPL6Q9BZF3 934 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 EGFL7Q9UHF1 273 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 LRFN2Q9ULH4 789 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SESN1Q9Y6P5 492 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PXDNQ92626 1479 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 CYB561D2O14569 222 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TGDSO95455 350 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 DBTP11182 482 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PPP3CCP48454 512 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 KRT33BQ14525 404 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TRIP4Q15650 581 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 OMDQ99983 421 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ACE2Q9BYF1 805 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ANKRD6Q9Y2G4 727 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 GAKO14976 1311 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 H0YC42 278 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 NADKO95544 446 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZBTB11O95625 1053 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC2A4P14672 509 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 PEX6Q13608 980 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 AARS2Q5JTZ9 985 aaKnown RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 XRRA1Q6P2D8 792 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TTC23LQ6PF05 361 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 ATXN3LQ9H3M9 355 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 EPB41L1Q9H4G0 881 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms