RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 FAM149B1Q96BN6 582 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 SUSD3Q96L08 255 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 PKMYT1Q99640 499 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 SEZ6LQ9BYH1 1024 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 NMUR2Q9GZQ4 415 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 RRN3Q9NYV6 651 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 TAS2R1Q9NYW7 299 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 NKX1-2Q9UD57 310 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-214ENST00000567572 WDR27A2RRH5 827 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 B4GALT3O60512 393 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 POLBP06746 335 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 SERPINA6P08185 405 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 SELPP16109 830 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 GRK2P25098 689 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 GARSP41250 739 aaKnown RBP18.15■□□□□ 0.5
CMTM3-214ENST00000567572 HTRA3P83110 453 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 DSC1Q08554 894 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 DNAL1Q4LDG9 190 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 WDR75Q8IWA0 830 aaKnown RBP18.15■□□□□ 0.5
CMTM3-214ENST00000567572 MYLPFQ96A32 169 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 SMARCD1Q96GM5 515 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 MECRQ9BV79 373 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 F8W8V4 182 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 MYL4P12829 197 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 GRIA1P42261 906 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 TAF11Q15544 211 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 TSNAXIP1Q2TAA8 658 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 DCAF6Q58WW2 860 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 CASC4Q6P4E1 433 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 RFX8Q6ZV50 586 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 FAM126BQ8IXS8 530 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 ARNTL2Q8WYA1 636 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 PGAP3Q96FM1 320 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-214ENST00000567572 NAF1Q96HR8 494 aaKnown RBP18.15■□□□□ 0.5
CMTM3-214ENST00000567572 KCNK16Q96T55 309 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 LGMNQ99538 433 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 FTHL17Q9BXU8 183 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 C1orf21Q9H246 121 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 TRIM17Q9Y577 477 aa18.15■□□□□ 0.5
CMTM3-214ENST00000567572 F8W810 466 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 DCLK1O15075 740 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 TYMPP19971 482 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 GP5P40197 560 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 DAOAP59103 153 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 IFRD2Q12894 506 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-214ENST00000567572 PYROXD2Q8N2H3 581 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 PDCD7Q8N8D1 485 aaKnown RBP18.14■□□□□ 0.49
CMTM3-214ENST00000567572 CPNE1Q99829 537 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 ULBP1Q9BZM6 244 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 CNGB3Q9NQW8 809 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 TAGLN3Q9UI15 199 aa18.14■□□□□ 0.49
CMTM3-214ENST00000567572 COL4A4P53420 1690 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ARHGEF37A1IGU5 675 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 AP3B1O00203 1094 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 EEF2KO00418 725 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 NRP1O14786 923 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 PLIN3O60664 434 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 DDHD2O94830 711 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ALDOAP04075 364 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ACADSP16219 412 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 YY1P25490 414 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 DEUP1Q05D60 604 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 AP1B1Q10567 949 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 FASTKD1Q53R41 847 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 NOMO2Q5JPE7 1267 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 GRTP1Q5TC63 336 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 MBLAC2Q68D91 279 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ZNF280BQ86YH2 543 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 OR10T2Q8NGX3 314 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 PPP1R14CQ8TAE6 165 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 RHOBTB2Q9BYZ6 727 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 UNC93B1Q9H1C4 597 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 TXNDC16Q9P2K2 825 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 M0QYT0 321 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ENTPD5O75356 428 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 SERPINE1P05121 402 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ITGA2BP08514 1039 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ATP6V1C1P21283 382 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 MGAT1P26572 445 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 MAGEA12P43365 314 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 RABGGTBP53611 331 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 AQP5P55064 265 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 SEMA3BQ13214 749 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 GPNMBQ14956 572 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ZRSR2Q15696 482 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 RINLQ6ZS11 566 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 HFE2Q6ZVN8 426 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ALYREFQ86V81 257 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 PIWIL2Q8TC59 973 aaKnown RBP18.13■□□□□ 0.49
CMTM3-214ENST00000567572 URGCPQ8TCY9 931 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 VAT1Q99536 393 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 PRDM12Q9H4Q4 367 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 LRRC40Q9H9A6 602 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 ZFATQ9P243 1243 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 PPARGC1AQ9UBK2 798 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms