RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 DQX1Q8TE96 717 aaKnown RBP9.52□□□□□ -0.89
CDH13-210ENST00000567445 SETD7Q8WTS6 366 aaKnown RBP9.52□□□□□ -0.89
CDH13-210ENST00000567445 ADAMTS14Q8WXS8 1223 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 LMLNQ96KR4 655 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 PRICKLE1Q96MT3 831 aaPredicted RBP9.52□□□□□ -0.89
CDH13-210ENST00000567445 KREMEN1Q96MU8 473 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 SERPINB11Q96P15 392 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 TRIM62Q9BVG3 475 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 BTBD1Q9H0C5 482 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 INTS2Q9H0H0 1204 aaKnown RBP9.52□□□□□ -0.89
CDH13-210ENST00000567445 OSGEPQ9NPF4 335 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 ST7Q9NRC1 585 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 TM7SF3Q9NS93 570 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 STIM2Q9P246 746 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 PCOLCE2Q9UKZ9 415 aa9.52□□□□□ -0.89
CDH13-210ENST00000567445 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
CDH13-210ENST00000567445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH13-210ENST00000567445 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 BIN1O00499 593 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 MED7O43513 233 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 RECKO95980 971 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 AFPP02771 609 aaKnown RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 ASLP04424 464 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 KRT5P13647 590 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 CSKP41240 450 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 RPS24P62847 133 aaKnown RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 PAK1Q13153 545 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 CDH18Q13634 790 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 TEAD4Q15561 434 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 MEA1Q16626 185 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 MS4A13Q5J8X5 152 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 USP30Q70CQ3 517 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 CCDC117Q8IWD4 279 aaPredicted RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 CARNMT1Q8N4J0 409 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 ADAM32Q8TC27 787 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 BIRC7Q96CA5 298 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 MYEOVQ96EZ4 313 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 MYO19Q96H55 970 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 SLC39A13Q96H72 371 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 SGK2Q9HBY8 427 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 SCML1Q9UN30 329 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 NAALADL1Q9UQQ1 740 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 APOBEC2Q9Y235 224 aaKnown RBP9.51□□□□□ -0.89
CDH13-210ENST00000567445 PCDHGB2Q9Y5G2 931 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 SLCO1B1Q9Y6L6 691 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 ZFYVE26Q68DK2 2539 aa9.51□□□□□ -0.89
CDH13-210ENST00000567445 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 ANKRD11Q6UB99 2663 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 CAPN9O14815 690 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 FLRT2O43155 660 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 RNASEH1O60930 286 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 LUC7L3O95232 432 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 MOCS2O96007 188 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 APOEP02649 317 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 CD27P26842 260 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 GRIA4P48058 902 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 STX17P56962 302 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 HNRNPA1L2Q32P51 320 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 CRTC2Q53ET0 693 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 FSCBQ5H9T9 825 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 PITRM1Q5JRX3 1037 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 DENND1BQ6P3S1 775 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 DBX2Q6ZNG2 339 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 TMEM110Q86TL2 294 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 TAC4Q86UU9 113 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 CFAP52Q8N1V2 620 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 PNPLA1Q8N8W4 532 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 KDM1BQ8NB78 822 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 BAHD1Q8TBE0 780 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 MRGPRX3Q96LB0 322 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 MED15Q96RN5 788 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 C1QTNF2Q9BXJ5 285 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 SRRTQ9BXP5 876 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 MTG2Q9H4K7 406 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 POPDC2Q9HBU9 364 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 TM9SF3Q9HD45 589 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 UBE2TQ9NPD8 197 aaPredicted RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 RALYQ9UKM9 306 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 INTS6Q9UL03 887 aaKnown RBP9.5□□□□□ -0.89
CDH13-210ENST00000567445 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 ANKRD6Q9Y2G4 727 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 SNX11Q9Y5W9 270 aa9.5□□□□□ -0.89
CDH13-210ENST00000567445 E5RJQ4 531 aa9.49□□□□□ -0.89
CDH13-210ENST00000567445 PAPSS1O43252 624 aaPredicted RBP9.49□□□□□ -0.89
CDH13-210ENST00000567445 SIN3BO75182 1162 aa9.49□□□□□ -0.89
CDH13-210ENST00000567445 FSBPO95073 299 aa9.49□□□□□ -0.89
CDH13-210ENST00000567445 MOCS3O95396 460 aa9.49□□□□□ -0.89
CDH13-210ENST00000567445 FGFR1OPO95684 399 aaKnown RBP9.49□□□□□ -0.89
CDH13-210ENST00000567445 SRPRAP08240 638 aaKnown RBP9.49□□□□□ -0.89
CDH13-210ENST00000567445 YWHAZP63104 245 aaKnown RBP9.49□□□□□ -0.89
CDH13-210ENST00000567445 SFSWAPQ12872 951 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms