RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 NUAK2Q9H093 628 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 ARFGAP3Q9NP61 516 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 ABHD10Q9NUJ1 306 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 RNF7Q9UBF6 113 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 CA14Q9ULX7 337 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 KIAA1551Q9HCM1 1747 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 PLA2G6O60733 806 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 BCAR3O75815 825 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 DPEP1P16444 411 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 ATP5F1P24539 256 aaPredicted RBP9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 TACR3P29371 465 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 MMP13P45452 471 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 SEC23BQ15437 767 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 CNGA3Q16281 694 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 SYTL1Q8IYJ3 562 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 PRSS3P2Q8NHM4 247 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 SMG7Q92540 1137 aaKnown RBP9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 MUL1Q969V5 352 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 ARPC5LQ9BPX5 153 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 STK33Q9BYT3 514 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 PANK3Q9H999 370 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 HELLSQ9NRZ9 838 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 PI4KBQ9UBF8 816 aa9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 HEMK1Q9Y5R4 338 aaPredicted RBP9.32□□□□□ -0.92
NIFKP4-201ENST00000567275 TTC34A8MYJ7 566 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 J3KTA2 159 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 CREB3O43889 395 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 MATN1P21941 496 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 SFPQP23246 707 aaKnown RBP eCLIP9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 DUSP1P28562 367 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 ANO7Q6IWH7 933 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 DENND1AQ8TEH3 1009 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 CUL5Q93034 780 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 ZNF778Q96MU6 729 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 RXFP3Q9NSD7 469 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 BTBD3Q9Y2F9 522 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 DTNAQ9Y4J8 743 aa9.31□□□□□ -0.92
NIFKP4-201ENST00000567275 PNMA6EA0A0J9YXQ4 647 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 FCHO1O14526 889 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 TM4SF1P30408 202 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 MORC3Q14149 939 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 CSHL1Q14406 222 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 STARD3Q14849 445 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 IPO4Q8TEX9 1081 aaKnown RBP9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 C18orf8Q96DM3 657 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 SEMA5BQ9P283 1151 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 BRCA1P38398 1863 aaKnown RBP9.3□□□□□ -0.92
NIFKP4-201ENST00000567275 MRC1P22897 1456 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 GLP2RO95838 553 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 ALADP13716 330 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 TECP42680 631 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 VPS41P49754 854 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 KLF9Q13886 244 aaPredicted RBP9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 TRIP6Q15654 476 aaKnown RBP9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 C10orf62Q5T681 223 aaPredicted RBP9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 XRRA1Q6P2D8 792 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 PIK3AP1Q6ZUJ8 805 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 AKAP1Q92667 903 aaKnown RBP eCLIP9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 C1QTNF7Q9BXJ2 289 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 EPS8L2Q9H6S3 715 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 KNSTRNQ9Y448 316 aa9.29□□□□□ -0.92
NIFKP4-201ENST00000567275 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 IFRD1O00458 451 aaPredicted RBP9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 HSPA5P11021 654 aaKnown RBP9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 DDR1Q08345 913 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 ELF2Q15723 593 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 ETFDHQ16134 617 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 CDC23Q9UJX2 597 aa9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 MAGED2Q9UNF1 606 aaPredicted RBP9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
NIFKP4-201ENST00000567275 N4BP2Q86UW6 1770 aaPredicted RBP9.27□□□□□ -0.92
NIFKP4-201ENST00000567275 CCDC187A0A096LP49 1063 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 E5RJQ4 531 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 INO80B-WBP1J3KQ70 363 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 PIP5K1BO14986 540 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 NPC1O15118 1278 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 TP73O15350 636 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 CTIFO43310 598 aaKnown RBP9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 CYP19A1P11511 503 aaPredicted RBP9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 PPM1AP35813 382 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 YPEL5P62699 121 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 CBFBQ13951 182 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 ACSM6Q6P461 480 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 TMEM41AQ96HV5 264 aa9.27□□□□□ -0.93
NIFKP4-201ENST00000567275 TUBA8Q9NY65 449 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms