RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PRKAG3Q9UGI9 489 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 ZNF180Q9UJW8 692 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 TRHDEQ9UKU6 1024 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 FNDC1Q4ZHG4 1894 aaPredicted RBP23.84■■□□□ 1.41
LINC00543-201ENST00000567234 TYROBPO43914 113 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 INHBAP08476 426 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 GARSP41250 739 aaKnown RBP23.84■■□□□ 1.41
LINC00543-201ENST00000567234 IFRD2Q12894 506 aaPredicted RBP23.84■■□□□ 1.41
LINC00543-201ENST00000567234 FAM133BQ5BKY9 247 aaKnown RBP23.84■■□□□ 1.41
LINC00543-201ENST00000567234 FAM182AQ5T1J6 154 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 LMNTD2Q8IXW0 634 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 GSDMBQ8TAX9 411 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 MICAL1Q8TDZ2 1067 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 MRRFQ96E11 262 aaKnown RBP23.84■■□□□ 1.41
LINC00543-201ENST00000567234 SERPINB11Q96P15 392 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 TMEM237Q96Q45 408 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 ATP11BQ9Y2G3 1177 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 NR2E3Q9Y5X4 410 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 SHROOM3Q8TF72 1996 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 FGF10O15520 208 aaPredicted RBP23.83■■□□□ 1.41
LINC00543-201ENST00000567234 FAM155BO75949 473 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 PTPN3P26045 913 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 COG7P83436 770 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 NRG1Q02297 640 aaPredicted RBP23.83■■□□□ 1.41
LINC00543-201ENST00000567234 PID1Q7Z2X4 250 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 SLC26A11Q86WA9 606 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 LRRC6Q86X45 466 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 CASP10Q92851 521 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 SCLYQ96I15 445 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 GPR62Q9BZJ7 368 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 PPP1R12CQ9BZL4 782 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 NMUR1Q9HB89 426 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 PLAC1Q9HBJ0 212 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 MARCH5Q9NX47 278 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 SEPT10Q9P0V9 454 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 L3MBTL1Q9Y468 752 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 PCDHA11Q9Y5I1 949 aa23.83■■□□□ 1.41
LINC00543-201ENST00000567234 A0A1W2PPM1 405 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 A0A1W2PQH9 124 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 FAM92AA1XBS5 289 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SDR42E2A6NKP2 422 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 ASMTLO95671 621 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 CXCL10P02778 98 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SLC11A1P49279 550 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 PDCD2Q16342 344 aaPredicted RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 LRRC26Q2I0M4 334 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 MANEALQ5VSG8 457 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 UNC5AQ6ZN44 842 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 TP53INP2Q8IXH6 220 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 LZTR1Q8N653 840 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 PDCD7Q8N8D1 485 aaKnown RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 NAF1Q96HR8 494 aaKnown RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 NAT9Q9BTE0 207 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 C11orf49Q9H6J7 331 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 KIF9Q9HAQ2 790 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 KLHL8Q9P2G9 620 aaPredicted RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 NEU3Q9UQ49 428 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 GREB1Q4ZG55 1949 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 ERI2A8K979 691 aaKnown RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 ZWINTO95229 277 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 KRT4P19013 534 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 PSMB4P28070 264 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 WDR4P57081 412 aaKnown RBP23.82■■□□□ 1.4
LINC00543-201ENST00000567234 KCNJ2P63252 427 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SPARCL1Q14515 664 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 STEAP4Q687X5 459 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 FUT10Q6P4F1 479 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SPATA21Q7Z572 469 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 ANKLE1Q8NAG6 615 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SPPL2BQ8TCT7 592 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 TMEM106CQ9BVX2 250 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 CATSPERBQ9H7T0 1116 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 COMMD8Q9NX08 183 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 SNX10Q9Y5X0 201 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 MAD1L1Q9Y6D9 718 aa23.82■■□□□ 1.4
LINC00543-201ENST00000567234 KCNU1A8MYU2 1149 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 H7C4K7 107 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 SPAG7O75391 227 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 PAGE1O75459 146 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 SLC2A3P11169 496 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 CCL23P55773 120 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 DDR2Q16832 855 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 LGSNQ5TDP6 509 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 ITPRIPL1Q6GPH6 555 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 C4orf33Q8N1A6 199 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 NETO2Q8NC67 525 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 HIPK3Q9H422 1215 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 SFMBT1Q9UHJ3 866 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 TLR6Q9Y2C9 796 aa23.81■■□□□ 1.4
LINC00543-201ENST00000567234 TCP11X1B4DZS4 312 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 KCNK1O00180 336 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TBC1D4O60343 1298 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 RTN3O95197 1032 aaPredicted RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 CA4P22748 312 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GRIA1P42261 906 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 PGFP49763 221 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 ROR2Q01974 943 aaKnown RBP23.8■■□□□ 1.4
LINC00543-201ENST00000567234 GPR17Q13304 367 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 BIRC2Q13490 618 aa23.8■■□□□ 1.4
LINC00543-201ENST00000567234 TCTN1Q2MV58 587 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms