RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
CAPN3-216ENST00000567071 MAT2AP31153 395 aaKnown RBP10.08□□□□□ -0.8
CAPN3-216ENST00000567071 SLC8A1P32418 973 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 STAT6P42226 847 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 PPP2CBP62714 309 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 PPP2CAP67775 309 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 POSTNQ15063 836 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 BMT2Q1RMZ1 405 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 KMT5BQ4FZB7 885 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 C10orf120Q5SQS8 335 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 SLC39A4Q6P5W5 647 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 KLHDC10Q6PID8 442 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 ZFAND4Q86XD8 727 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 MMAAQ8IVH4 418 aaKnown RBP10.08□□□□□ -0.8
CAPN3-216ENST00000567071 AHI1Q8N157 1196 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 POMGNT1Q8WZA1 660 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 IFT43Q96FT9 208 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 P2RY11Q96G91 374 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 CALML4Q96GE6 196 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 HPDLQ96IR7 371 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 ANKRD36BP1Q96IX9 119 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 SRRTQ9BXP5 876 aaKnown RBP10.08□□□□□ -0.8
CAPN3-216ENST00000567071 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 NUP62CLQ9H1M0 184 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 RUBCNLQ9H714 662 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 PRDM8Q9NQV8 689 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM30AQ9NV96 361 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 IL37Q9NZH6 218 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM63CQ9P1W3 806 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 CCDC39Q9UFE4 941 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 CYTH4Q9UIA0 394 aa10.08□□□□□ -0.8
CAPN3-216ENST00000567071 PRAMEF33A0A0G2JMD5 474 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 FAM92AA1XBS5 289 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 TTLL8A6PVC2 850 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 ZNF891A8MT65 544 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 CLDN5O00501 218 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 MUSKO15146 869 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 PRAMEF10O60809 474 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 RNGTTO60942 597 aaKnown RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 NEBLO76041 1014 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 HGFP14210 728 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 PSMD8P48556 350 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 COG7P83436 770 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 EHHADHQ08426 723 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 DHX8Q14562 1220 aaKnown RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 E2F4Q16254 413 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 CAMK4Q16566 473 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 POM121L1PQ3SYA9 428 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM119Q4V9L6 283 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 RRAGBQ5VZM2 374 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 GRAMD1CQ8IYS0 662 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM74Q96NL1 305 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 GFM1Q96RP9 751 aaKnown RBP10.07□□□□□ -0.8
CAPN3-216ENST00000567071 KCNK16Q96T55 309 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 ABCB8Q9NUT2 735 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 SALL4Q9UJQ4 1053 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 GGA2Q9UJY4 613 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 ODF2LQ9ULJ1 636 aa10.07□□□□□ -0.8
CAPN3-216ENST00000567071 SCN8AQ9UQD0 1980 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 ANKRD63C9JTQ0 380 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 STMND1H3BQB6 276 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 SIN3BO75182 1162 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 FAM13AO94988 1023 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 PABPC1P11940 636 aaKnown RBP10.06□□□□□ -0.8
CAPN3-216ENST00000567071 C5AR1P21730 350 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 PDX1P52945 283 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 ZXDCQ2QGD7 858 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-216ENST00000567071 MPPE1Q53F39 396 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 PERM1Q5SV97 790 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CCDC183Q5T5S1 534 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 KCNK18Q7Z418 384 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 LIMS2Q7Z4I7 341 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CPXM2Q8N436 756 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 IL22RA1Q8N6P7 574 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 IQUBQ8NA54 791 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 B3GALNT2Q8NCR0 500 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CPT1CQ8TCG5 803 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 GPBAR1Q8TDU6 330 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 APOBEC4Q8WW27 367 aaKnown RBP10.06□□□□□ -0.8
CAPN3-216ENST00000567071 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-216ENST00000567071 TMEM159Q96B96 161 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 SMARCD1Q96GM5 515 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
CAPN3-216ENST00000567071 IL12RB2Q99665 862 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CCDC3Q9BQI4 270 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms