RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 YJEFN3A6XGL0 299 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 E7ENQ6 273 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 ZBTB24O43167 697 aaPredicted RBP11.83□□□□□ -0.52
CDH1-210ENST00000566612 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
CDH1-210ENST00000566612 TOMM70O94826 608 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 PIGNO95427 931 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 EDNRBP24530 442 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 PTDSS1P48651 473 aaKnown RBP11.83□□□□□ -0.52
CDH1-210ENST00000566612 MAXP61244 160 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 GHRHRQ02643 423 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 MAP7Q14244 749 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 EMC10Q5UCC4 262 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 ISLR2Q6UXK2 745 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 PYDC1Q8WXC3 89 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 APBB2Q92870 758 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.52
CDH1-210ENST00000566612 MAGEB16A2A368 324 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 NCF1BA6NI72 391 aaPredicted RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 NCF1CA8MVU1 366 aaPredicted RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 ZNF189O75820 626 aaPredicted RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 BPGMP07738 259 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 COL1A2P08123 1366 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 NCF1P14598 390 aaPredicted RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 MRPS6P82932 125 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 OTOP3Q7RTS5 596 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 LCA5Q86VQ0 697 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 NUP93Q8N1F7 819 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TRIML2Q8N7C3 387 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 BRI3BPQ8WY22 251 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 MARK4Q96L34 752 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CCDC134Q9H6E4 229 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SNX15Q9NRS6 342 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 MORF4L1Q9UBU8 362 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 AFF4Q9UHB7 1163 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 SLC12A4Q9UP95 1085 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SCAMP3O14828 347 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 APOA4P06727 396 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CCNB1P14635 433 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 PTPN9P43378 593 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 NPY2RP49146 381 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 FCGRTP55899 365 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SLC34A1Q06495 639 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TBL3Q12788 808 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 OLIG2Q13516 323 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CYTH1Q15438 398 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CCL14Q16627 93 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 RARS2Q5T160 578 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 AGAP9Q5VTM2 703 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 OLFML1Q6UWY5 402 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 ZNF567Q8N184 647 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TMEM86AQ8N2M4 240 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 DCAKDQ8WVC6 231 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 EGFL8Q99944 293 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 COLEC11Q9BWP8 271 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 HACD3Q9P035 362 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SUPT3HB4E1H0 165 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 MGRN1O60291 552 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TPST1O60507 370 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SUPT3HO75486 399 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 DDHD2O94830 711 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TOP3BO95985 862 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 THRAP10827 490 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 PTPN7P35236 360 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 TBCCQ15814 346 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 ATP6V0D2Q8N8Y2 350 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
CDH1-210ENST00000566612 MAF1Q9H063 256 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 CRYL1Q9Y2S2 319 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 DERAQ9Y315 318 aa11.82□□□□□ -0.52
CDH1-210ENST00000566612 DNAJC6O75061 913 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 DAB1O75553 588 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CD151P48509 253 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TBX4P57082 545 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 CCDC153Q494R4 210 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 VWA5B1Q5TIE3 1220 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 FAM171A1Q5VUB5 890 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 C16orf89Q6UX73 402 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 RNF180Q86T96 592 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TMEM110Q86TL2 294 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 ZNF398Q8TD17 642 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 EME1Q96AY2 570 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 PCED1BQ96HM7 432 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 NCKIPSDQ9NZQ3 722 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 RHOBTB1O94844 696 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 CHRM3P20309 590 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 FOXD4Q12950 439 aaPredicted RBP11.81□□□□□ -0.52
CDH1-210ENST00000566612 RBBP7Q16576 425 aa11.81□□□□□ -0.52
CDH1-210ENST00000566612 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms