RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 HS3ST4Q9Y661 456 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 PTPRBP23467 1997 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 ZFHX4Q86UP3 3567 aa18.89■□□□□ 0.61
USB1-213ENST00000566292 PLXNB3Q9ULL4 1909 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 DOCK4Q8N1I0 1966 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 DOCK9Q9BZ29 2069 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 VAV1P15498 845 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 TFE3P19532 575 aaPredicted RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 SLC8A1P32418 973 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 CDH5P33151 784 aaPredicted RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 NOS2P35228 1153 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 GRIA4P48058 902 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 GALCP54803 685 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 AUHQ13825 339 aaKnown RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 RAPGEF1Q13905 1077 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 KCNJ12Q14500 433 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 KLHDC7AQ5VTJ3 777 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 RNF219Q5W0B1 726 aaPredicted RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 KIAA0895LQ68EN5 471 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 C14orf80Q86SX3 495 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 CHCHD4Q8N4Q1 142 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 AADATQ8N5Z0 425 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 ALG14Q96F25 216 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 RPRD1AQ96P16 312 aaPredicted RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 NPY6RQ99463 290 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
USB1-213ENST00000566292 SYNCQ9H7C4 482 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 PIGVQ9NUD9 493 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 ADAMTS1Q9UHI8 967 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 PCOLCE2Q9UKZ9 415 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 VANGL2Q9ULK5 521 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 ANKRD6Q9Y2G4 727 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 PCDHB9Q9Y5E1 797 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 CHD6Q8TD26 2715 aa18.88■□□□□ 0.61
USB1-213ENST00000566292 FAM170AA1A519 330 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 FAM47DPA6NHR8 397 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 C10orf142B7Z368 130 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 M0QYT0 321 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 PAGE1O75459 146 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 TRIM16O95361 564 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 CYP11B1P15538 503 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 PSMD8P48556 350 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 SNX16P57768 344 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 BPIFB4P59827 614 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 ZNF423Q2M1K9 1284 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 KCNT1Q5JUK3 1230 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 NCEH1Q6PIU2 408 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 DBX2Q6ZNG2 339 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 RAB44Q7Z6P3 723 aaPredicted RBP18.87■□□□□ 0.61
USB1-213ENST00000566292 KDF1Q8NAX2 398 aaPredicted RBP18.87■□□□□ 0.61
USB1-213ENST00000566292 TMEM35BQ8NCS4 154 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 FRS2Q8WU20 508 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 EBF2Q9HAK2 575 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 ANLNQ9NQW6 1124 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 MSRB2Q9Y3D2 182 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 CFAP47Q6ZTR5 3102 aa18.87■□□□□ 0.61
USB1-213ENST00000566292 I6L893 689 aaPredicted RBP18.86■□□□□ 0.61
USB1-213ENST00000566292 RNASEH2AO75792 299 aaKnown RBP18.86■□□□□ 0.61
USB1-213ENST00000566292 ADCY5O95622 1261 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 FTH1P19P0C7X4 201 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 GABRB2P47870 512 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 SULT2A1Q06520 285 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 TEAD4Q15561 434 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 C5orf22Q49AR2 442 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 TCP11X2Q5H9J9 407 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 ZDHHC17Q8IUH5 632 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 BAHD1Q8TBE0 780 aaPredicted RBP18.86■□□□□ 0.61
USB1-213ENST00000566292 SETD7Q8WTS6 366 aaKnown RBP18.86■□□□□ 0.61
USB1-213ENST00000566292 OMDQ99983 421 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 SIK2Q9H0K1 926 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 ARHGEF38Q9NXL2 777 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 ZMIZ1Q9ULJ6 1067 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 FZD4Q9ULV1 537 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 PCDHGB2Q9Y5G2 931 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 OR51B4Q9Y5P0 310 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 ZZEF1O43149 2961 aa18.86■□□□□ 0.61
USB1-213ENST00000566292 A0A1W2PPC4 97 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 FAM221BA6H8Z2 402 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 PES1O00541 588 aaKnown RBP18.85■□□□□ 0.61
USB1-213ENST00000566292 KCNK3O14649 394 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 ADH1BP00325 375 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 UCHL3P15374 230 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 C5AR1P21730 350 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 RDXP35241 583 aaKnown RBP18.85■□□□□ 0.61
USB1-213ENST00000566292 NNMTP40261 264 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 SULT1E1P49888 294 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 METAP1P53582 386 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 OXCT1P55809 520 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 RNASE9P60153 205 aaKnown RBP18.85■□□□□ 0.61
USB1-213ENST00000566292 SFSWAPQ12872 951 aaKnown RBP18.85■□□□□ 0.61
USB1-213ENST00000566292 MTA1Q13330 715 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 ELAVL3Q14576 367 aaKnown RBP18.85■□□□□ 0.61
USB1-213ENST00000566292 TAF3Q5VWG9 929 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 GLRX5Q86SX6 157 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 XYLT1Q86Y38 959 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 PNPLA1Q8N8W4 532 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 OR2T34Q8NGX1 318 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 NT5C3BQ969T7 300 aa18.85■□□□□ 0.61
USB1-213ENST00000566292 SLC6A18Q96N87 628 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms