RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 NOC3LQ8WTT2 800 aaKnown RBP5.47□□□□□ -1.53
CNOT1-209ENST00000566240 NCSTNQ92542 709 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 C5orf34Q96MH7 638 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 HS6ST2Q96MM7 605 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 GPR78Q96P69 363 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 NR1H4Q96RI1 486 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-209ENST00000566240 MMS19Q96T76 1030 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 ITPAQ9BY32 194 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 CIPCQ9C0C6 399 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 LMAN2LQ9H0V9 348 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 TTC12Q9H892 705 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-209ENST00000566240 EIF2B3Q9NR50 452 aaKnown RBP5.47□□□□□ -1.53
CNOT1-209ENST00000566240 SMYD2Q9NRG4 433 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 DIAPH3Q9NSV4 1193 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 GAR1Q9NY12 217 aaKnown RBP5.47□□□□□ -1.53
CNOT1-209ENST00000566240 KCND2Q9NZV8 630 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 SLC25A13Q9UJS0 675 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 SARDHQ9UL12 918 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 ST3GAL5Q9UNP4 418 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 OSGIN2Q9Y236 505 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 TSC22D4Q9Y3Q8 395 aa5.47□□□□□ -1.53
CNOT1-209ENST00000566240 TNFSF14O43557 240 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 CCNT1O60563 726 aaKnown RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 MT-CO3P00414 261 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 ELFN1P0C7U0 828 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 LAMP2P13473 410 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 HOXB9P17482 250 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 CCT8P50990 548 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 RPS3AP61247 264 aaKnown RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 UFM1P61960 85 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 DGCR2P98153 550 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 BYSLQ13895 437 aaKnown RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 GXYLT1Q4G148 440 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 GALNT7Q86SF2 657 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 TMEM200AQ86VY9 491 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 BRSK2Q8IWQ3 736 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 TERB1Q8NA31 727 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 CXorf38Q8TB03 319 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 CNOT9Q92600 299 aaKnown RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 ZNF845Q96IR2 970 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 LBHD1Q9BQE6 289 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 CENPOQ9BU64 300 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 NPLQ9BXD5 320 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 PRKRIP1Q9H875 184 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 BRF2Q9HAW0 419 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 PCDHB16Q9NRJ7 776 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 ASNSD1Q9NWL6 643 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 LRIT1Q9P2V4 623 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 TBC1D29Q9UFV1 150 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 VPS28Q9UK41 221 aa5.46□□□□□ -1.54
CNOT1-209ENST00000566240 HEMK1Q9Y5R4 338 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-209ENST00000566240 NPIPB15A6NHN6 443 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 AP3D1O14617 1153 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 PER2O15055 1255 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 AHCYL1O43865 530 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ORC4O43929 436 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 EXOC3O60645 756 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 CNTN5O94779 1100 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ADH4P08319 380 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 COX7A2P14406 83 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ZNF20P17024 532 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ATF7P17544 494 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 MPLP40238 635 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ARL1P40616 181 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 MLH1P40692 756 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 MTNR1AP48039 350 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 VPS41P49754 854 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ZNF84P51523 738 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 OAZ1P54368 228 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 IL13RA2Q14627 380 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 AP5B1Q2VPB7 878 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 NAPEPLDQ6IQ20 393 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ZNF280DQ6N043 979 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 KLHL24Q6TFL4 600 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 NAPRTQ6XQN6 538 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 GALNT5Q7Z7M9 940 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 CNTROBQ8N137 903 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ACTRT2Q8TDY3 377 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 RAB40AQ8WXH6 277 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 USP6NLQ92738 828 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ATP2A3Q93084 1043 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 SAAL1Q96ER3 474 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 COQ10AQ96MF6 247 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 C1QTNF3Q9BXJ4 246 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 RANBP17Q9H2T7 1088 aaKnown RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 EPHX3Q9H6B9 360 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ANKEF1Q9NU02 776 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 SEPT11Q9NVA2 429 aaKnown RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 SYBUQ9NX95 663 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 ASIC5Q9NY37 505 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 HDAC6Q9UBN7 1215 aa5.45□□□□□ -1.54
CNOT1-209ENST00000566240 REXO2Q9Y3B8 237 aaKnown RBP5.45□□□□□ -1.54
CNOT1-209ENST00000566240 GTPBP1O00178 669 aaKnown RBP5.44□□□□□ -1.54
CNOT1-209ENST00000566240 TGFB1I1O43294 461 aa5.44□□□□□ -1.54
CNOT1-209ENST00000566240 FOXD2O60548 495 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-209ENST00000566240 SGPL1O95470 568 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms