RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ARSEP51690 589 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RPS16P62249 146 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 PRAMEP78395 509 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 FAM189BP81408 668 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TAP2Q03519 686 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TEFQ10587 303 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 FOXO1Q12778 655 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 LAPTM5Q13571 262 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 IL10RAQ13651 578 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 DDX39BQ13838 428 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 LRRC14Q15048 493 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KCNA10Q16322 511 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 UGP2Q16851 508 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 Q3ZCU0 254 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GLRA4Q5JXX5 417 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PEAR1Q5VY43 1037 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 SPECC1LQ69YQ0 1117 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KRT80Q6KB66 452 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MTHFD1LQ6UB35 978 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MACC1Q6ZN28 852 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 STXBP4Q6ZWJ1 553 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MIER3Q7Z3K6 550 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RABEPKQ7Z6M1 372 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PRPF39Q86UA1 669 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 SPATA24Q86W54 205 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PSTKQ8IV42 348 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 ZFPM1Q8IX07 1006 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PPIL6Q8IXY8 311 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 WDTC1Q8N5D0 677 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MB21D1Q8N884 522 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CFAP61Q8NHU2 1237 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GIMAP7Q8NHV1 300 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 FAM71BQ8TC56 605 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 BSNDQ8WZ55 320 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RAB7BQ96AH8 199 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 EDC3Q96F86 508 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 WDR18Q9BV38 432 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RHBGQ9H310 441 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 TUBD1Q9UJT1 453 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MTMR6Q9Y217 621 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RUVBL1Q9Y265 456 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 SPO11Q9Y5K1 396 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SLC30A1Q9Y6M5 507 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CEMIPQ8WUJ3 1361 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ATXN7O15265 892 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ADAMTS4O75173 837 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CLEC3AO75596 197 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PLGP00747 810 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ENO2P09104 434 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 VSIG8P0DPA2 414 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 IFNAR1P17181 557 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TYMPP19971 482 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FGFR2P21802 821 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TXKP42681 527 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ZNF81P51508 661 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PSMD7P51665 324 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 MAP2K6P52564 334 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CASP9P55211 416 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FMO1Q01740 532 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SF3A3Q12874 501 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-216ENST00000565803 ACVR2BQ13705 512 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CBFBQ13951 182 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 GNA13Q14344 377 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PPP6R3Q5H9R7 873 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 TTI2Q6NXR4 508 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 UNC13DQ70J99 1090 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 BMP8AQ7Z5Y6 402 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TMCO2Q7Z6W1 182 aaPredicted RBP3.16□□□□□ -1.9
CHD9-216ENST00000565803 SESTD1Q86VW0 696 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KRT78Q8N1N4 520 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SCML4Q8N228 414 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 C3orf20Q8ND61 904 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 BPIFCQ8NFQ6 507 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 HDAC7Q8WUI4 952 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 CDKL2Q92772 493 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 KAT2AQ92830 837 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 HPS1Q92902 700 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FER1L6-AS2Q96M78 137 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 POFUT1Q9H488 388 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 DNAJC18Q9H819 358 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 NOD2Q9HC29 1040 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 UCKL1Q9NWZ5 548 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 EHD2Q9NZN4 543 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 IL19Q9UHD0 177 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 BACE2Q9Y5Z0 518 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ACOD1A6NK06 481 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 FAM177BA6PVY3 158 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 HSBP1L1C9JCN9 74 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 F8W810 466 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SYT5O00445 386 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TEX28O15482 410 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 BNIP3LO60238 219 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 NIPSNAP2O75323 286 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 ERLIN2O94905 339 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 TRIM16O95361 564 aa3.16□□□□□ -1.9
CHD9-216ENST00000565803 SERPINB2P05120 415 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms