RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 NDST4Q9H3R1 872 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 ANKRD6Q9Y2G4 727 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 MSRB2Q9Y3D2 182 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 CEP83Q9Y592 693 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 HS3ST4Q9Y661 456 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 PLK4O00444 970 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 ZNF883P0CG24 379 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 CCR1P32246 355 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 GRIA4P48058 902 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 SLC6A3Q01959 620 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 AUHQ13825 339 aaKnown RBP24.48■■□□□ 1.51
RAB40C-209ENST00000565511 KCNJ12Q14500 433 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 TPD52L1Q16890 204 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-209ENST00000565511 VWA3BQ502W6 1294 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 EFHC1Q5JVL4 640 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 CCDC117Q8IWD4 279 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-209ENST00000565511 FRS2Q8WU20 508 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 SLC6A18Q96N87 628 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 OSGEPQ9NPF4 335 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 SAMSN1Q9NSI8 373 aaKnown RBP24.48■■□□□ 1.51
RAB40C-209ENST00000565511 PIGVQ9NUD9 493 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 VANGL2Q9ULK5 521 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 ZFYVE26Q68DK2 2539 aa24.48■■□□□ 1.51
RAB40C-209ENST00000565511 A0A1B0GVM2 712 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 TARSL2A2RTX5 802 aaKnown RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 TCAF2A6NFQ2 919 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 WNT9AO14904 365 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 RNASEH2AO75792 299 aaKnown RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 MOCS3O95396 460 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 WNT1P04628 370 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 PRKCSHP14314 528 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 ABCB4P21439 1286 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 SLC8A1P32418 973 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 HNRNPDQ14103 355 aaKnown RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 DRAP1Q14919 205 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 ZNF423Q2M1K9 1284 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 ARTNQ5T4W7 220 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 SETD7Q8WTS6 366 aaKnown RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 RNF34Q969K3 372 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 RPRD1AQ96P16 312 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-209ENST00000565511 TUBGCP2Q9BSJ2 902 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 TMPRSS4Q9NRS4 437 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 TOR4AQ9NXH8 423 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 ADAMTS1Q9UHI8 967 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 OR51B4Q9Y5P0 310 aa24.47■■□□□ 1.51
RAB40C-209ENST00000565511 H0Y8X5 98 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 PAGE1O75459 146 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 CNTN5O94779 1100 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 ADCY5O95622 1261 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 KRT9P35527 623 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 CTSKP43235 329 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 PLK1P53350 603 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 C2CD6Q53TS8 623 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 TRNP1Q6NT89 227 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 IL27RAQ6UWB1 636 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 DBX2Q6ZNG2 339 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 ZNF397Q8NF99 534 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-209ENST00000565511 ADAMTS14Q8WXS8 1223 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 NAA15Q9BXJ9 866 aaKnown RBP24.46■■□□□ 1.51
RAB40C-209ENST00000565511 SLC12A6Q9UHW9 1150 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 SCML1Q9UN30 329 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 NCKAP1Q9Y2A7 1128 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 PCDHB9Q9Y5E1 797 aa24.46■■□□□ 1.51
RAB40C-209ENST00000565511 DMXL2Q8TDJ6 3036 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 FAM221BA6H8Z2 402 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 M0QYT0 321 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 RNASEH1O60930 286 aaKnown RBP24.45■■□□□ 1.5
RAB40C-209ENST00000565511 TRIM16O95361 564 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 SLC2A3P11169 496 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 DRD3P35462 400 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 PPP2CBP62714 309 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 PPP2CAP67775 309 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 IL9RQ01113 521 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 RAPGEF1Q13905 1077 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 RABGAP1LQ5R372 815 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 KLHDC7AQ5VTJ3 777 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 TAF3Q5VWG9 929 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 RNF219Q5W0B1 726 aaPredicted RBP24.45■■□□□ 1.5
RAB40C-209ENST00000565511 GLRX5Q86SX6 157 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 ZNF683Q8IZ20 524 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 ZCCHC14Q8WYQ9 949 aaKnown RBP24.45■■□□□ 1.5
RAB40C-209ENST00000565511 NPY6RQ99463 290 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 SARDHQ9UL12 918 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 DOCK4Q8N1I0 1966 aa24.45■■□□□ 1.5
RAB40C-209ENST00000565511 A0A1W2PPC4 97 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 CDH5P33151 784 aaPredicted RBP24.44■■□□□ 1.5
RAB40C-209ENST00000565511 NOS2P35228 1153 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 ADPRHP54922 357 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 ALFQ53S48 1182 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 TTC39BQ5VTQ0 682 aaPredicted RBP24.44■■□□□ 1.5
RAB40C-209ENST00000565511 FAM114A1Q8IWE2 563 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 OR2T34Q8NGX1 318 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 NOX5Q96PH1 765 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 OMDQ99983 421 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 NUP62CLQ9H1M0 184 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 SYNCQ9H7C4 482 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 FZD4Q9ULV1 537 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 PCDHGB2Q9Y5G2 931 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 FAM208BQ5VWN6 2430 aa24.44■■□□□ 1.5
RAB40C-209ENST00000565511 CAPNS1P04632 268 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms