RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 STK33Q9BYT3 514 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 ZDHHC5Q9C0B5 715 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 VPS16Q9H269 839 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 PDCL3Q9H2J4 239 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 SGK2Q9HBY8 427 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 FBXL12Q9NXK8 326 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 SNX10Q9Y5X0 201 aa10.34□□□□□ -0.75
CMTM3-209ENST00000565003 A0A1B0GVT2 93 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 TARSL2A2RTX5 802 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SH3BP5O60239 455 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 RNASEH1O60930 286 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 CNTN5O94779 1100 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FSBPO95073 299 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 ADCY5O95622 1261 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 LSM8O95777 96 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 IGHV4-34P06331 123 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SCNN1AP37088 669 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 PSMD8P48556 350 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 CSNK1EP49674 416 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 CXCR3P49682 368 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 PLK1P53350 603 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 NOMO3P69849 1222 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SIM1P81133 766 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SLC12A1Q13621 1099 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 C5orf22Q49AR2 442 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 LAYNQ6UX15 382 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 ERICH1Q86X53 443 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 ZNF683Q8IZ20 524 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 STK40Q8N2I9 435 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 AADATQ8N5Z0 425 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 GANCQ8TET4 914 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SLC20A1Q8WUM9 679 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 CPA5Q8WXQ8 436 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 ALG14Q96F25 216 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 PGAP3Q96FM1 320 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 GBP4Q96PP9 640 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 TBCBQ99426 244 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 TKTL2Q9H0I9 626 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 NEUROG2Q9H2A3 272 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 GAREM1Q9H706 876 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 TM9SF3Q9HD45 589 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FAM207AQ9NSI2 230 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FANCLQ9NW38 375 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 ARHGEF38Q9NXL2 777 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 RRN3Q9NYV6 651 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 TMEM59LQ9UK28 342 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 NOCTQ9UK39 431 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 STAP1Q9ULZ2 295 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 SCML1Q9UN30 329 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 FNDC3AQ9Y2H6 1198 aaKnown RBP10.33□□□□□ -0.76
CMTM3-209ENST00000565003 OR51B4Q9Y5P0 310 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 KNL1Q8NG31 2342 aa10.33□□□□□ -0.76
CMTM3-209ENST00000565003 CEP295Q9C0D2 2601 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.32□□□□□ -0.76
CMTM3-209ENST00000565003 FAM47DPA6NHR8 397 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 C10orf142B7Z368 130 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 GOLGA8SH3BPF8 625 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 GFPT2O94808 682 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 CHRNB2P17787 502 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 CD27P26842 260 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SLC8A1P32418 973 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 AFF3P51826 1226 aaKnown RBP10.32□□□□□ -0.76
CMTM3-209ENST00000565003 METAP1P53582 386 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 GALCP54803 685 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 JAM2P57087 298 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 POLR2FP61218 127 aaKnown RBP10.32□□□□□ -0.76
CMTM3-209ENST00000565003 FMO1Q01740 532 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 DEUP1Q05D60 604 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SULT2A1Q06520 285 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 MTA1Q13330 715 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SLC14A1Q13336 389 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ZNF177Q13360 481 aaPredicted RBP10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ELAVL3Q14576 367 aaKnown RBP10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ST3GAL2Q16842 350 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 KIF19Q2TAC6 998 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 HLA-BQ31612 363 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ALFQ53S48 1182 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 BRMS1LQ5PSV4 323 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ARTNQ5T4W7 220 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 KIAA0895LQ68EN5 471 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 NCEH1Q6PIU2 408 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 BNIPLQ7Z465 357 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 NAXDQ8IW45 347 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 CFAP57Q96MR6 1250 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 OMDQ99983 421 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 FEM1AQ9BSK4 669 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SIK2Q9H0K1 926 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 WDCPQ9H6R7 721 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 NLRC4Q9NPP4 1024 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 ADAMTS1Q9UHI8 967 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 FZD4Q9ULV1 537 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 NCKAP1Q9Y2A7 1128 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 TBC1D30Q9Y2I9 924 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
CMTM3-209ENST00000565003 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms