RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 PRRC2BQ5JSZ5 2229 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 HEPACAM2A8MVW5 462 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 H0Y626 953 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 SGK1O00141 431 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 GFRA2O00451 464 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 NDC80O14777 642 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 ECI2O75521 394 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 CNTN5O94779 1100 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 LAMP2P13473 410 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 CCDC85BQ15834 202 aaPredicted RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 TPGS1Q6ZTW0 290 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 CARNMT1Q8N4J0 409 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 NOA1Q8NC60 698 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 NSMCE1Q8WV22 266 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 MYADMQ96S97 322 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 MAGEH1Q9H213 219 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 SP110Q9HB58 689 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 MARK1Q9P0L2 795 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 SAE1Q9UBE0 346 aaPredicted RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 AMACRQ9UHK6 382 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 UTP11Q9Y3A2 253 aaKnown RBP13.15□□□□□ -0.3
CLK3-214ENST00000564096 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
CLK3-214ENST00000564096 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 BCLAF3A2AJT9 711 aaKnown RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 RASA4BC9J798 803 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 RASA4O43374 803 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 RAD51CO43502 376 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 NEBLO76041 1014 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 MAP3K6O95382 1288 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 FCARP24071 287 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 MCM3P25205 808 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 STIP1P31948 543 aaKnown RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 VIPR2P41587 438 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 IRAK1P51617 712 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 PPIDQ08752 370 aaKnown RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 AP1B1Q10567 949 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 POLD3Q15054 466 aaPredicted RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 PRKD1Q15139 912 aaPredicted RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 ANO4Q32M45 955 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
CLK3-214ENST00000564096 AFMIDQ63HM1 303 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 TTC27Q6P3X3 843 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 CCDC13Q8IYE1 715 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 CPA6Q8N4T0 437 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 ALLCQ8N6M5 410 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 IRF7Q92985 503 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 HPCAL4Q9UM19 191 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 TBC1D30Q9Y2I9 924 aa13.14□□□□□ -0.31
CLK3-214ENST00000564096 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 NEDD8-MDP1E9PL57 170 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 KCNN4O15554 427 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 MBTPS2O43462 519 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 IFNB1P01574 187 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 TUBBP07437 444 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 ADH5P11766 374 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 PSMC3P17980 439 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 HOXD9P28356 352 aaPredicted RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 SGSHP51688 502 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 GNA12Q03113 381 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 GAD2Q05329 585 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 FCHO2Q0JRZ9 810 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 NR1H3Q13133 447 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 PTK6Q13882 451 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 P3H1Q32P28 736 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 C4orf22Q6V702 233 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 ARHGAP12Q8IWW6 846 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 HTR3CQ8WXA8 447 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 BHMTQ93088 406 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
CLK3-214ENST00000564096 XPO6Q96QU8 1125 aaKnown RBP13.13□□□□□ -0.31
CLK3-214ENST00000564096 VAT1Q99536 393 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms