RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 AHI1Q8N157 1196 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 C12orf29Q8N999 325 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 OR14C36Q8NHC7 312 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 ATXN7L3BQ96GX2 97 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 CDK5RAP1Q96SZ6 601 aaKnown RBP16.52■□□□□ 0.24
RNF40-205ENST00000563909 UCKL1Q9NWZ5 548 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
RNF40-205ENST00000563909 TBC1D3DA0A087WVF3 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3IA0A087WXS9 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3EA0A087X179 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3KA0A087X1G2 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3FA6NER0 549 aaPredicted RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 ENO4A6NNW6 628 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3LB9A6J9 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 MAPK13O15264 365 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 MAGEC1O60732 1142 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 GJB6O95452 261 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ITGB2P05107 769 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 GP1BAP07359 652 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3HP0C7X1 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 SFTPCP11686 197 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 DGKAP23743 735 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ERCC5P28715 1186 aaPredicted RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 SLC8A1P32418 973 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 STX1AQ16623 288 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3GQ6DHY5 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3CQ6IPX1 549 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TTI2Q6NXR4 508 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 CLEC20AQ6ZU45 233 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 KIAA0907Q7Z7F0 614 aaPredicted RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 IQCHQ86VS3 1027 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 TBC1D3Q8IZP1 549 aaPredicted RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 MAPK15Q8TD08 544 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 CLIC5Q9NZA1 410 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 MARCH2Q9P0N8 246 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 ATXN7L1Q9ULK2 861 aaPredicted RBP16.51■□□□□ 0.23
RNF40-205ENST00000563909 MAN2B2Q9Y2E5 1009 aa16.51■□□□□ 0.23
RNF40-205ENST00000563909 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 PMS2P1A4D2B8 440 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 CDRT15L2A8MXV6 281 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
RNF40-205ENST00000563909 CASP4P49662 377 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 ADPRHP54922 357 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 STX17P56962 302 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 PPP2CBP62714 309 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 PPP2CAP67775 309 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 BIRC3Q13489 604 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 CCDC186Q7Z3E2 898 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 CRYBG2Q8N1P7 616 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 ARL14Q8N4G2 192 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.5■□□□□ 0.23
RNF40-205ENST00000563909 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 PRR11Q96HE9 360 aaPredicted RBP16.5■□□□□ 0.23
RNF40-205ENST00000563909 APOLD1Q96LR9 279 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 SEMA3CQ99985 751 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 TJP2Q9UDY2 1190 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 TPX2Q9ULW0 747 aaKnown RBP16.5■□□□□ 0.23
RNF40-205ENST00000563909 PCDHGA8Q9Y5G5 932 aa16.5■□□□□ 0.23
RNF40-205ENST00000563909 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
RNF40-205ENST00000563909 LATO43561 262 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 EPB41P11171 864 aaKnown RBP16.49■□□□□ 0.23
RNF40-205ENST00000563909 KRT13P13646 458 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 GOT1P17174 413 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 KIF11P52732 1056 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 ST8SIA6P61647 398 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 TYRO3Q06418 890 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 OVGP1Q12889 678 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 STAT4Q14765 748 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 HNRNPA1L2Q32P51 320 aaKnown RBP16.49■□□□□ 0.23
RNF40-205ENST00000563909 SND1Q7KZF4 910 aaKnown RBP eCLIP16.49■□□□□ 0.23
RNF40-205ENST00000563909 PRPF39Q86UA1 669 aaKnown RBP16.49■□□□□ 0.23
RNF40-205ENST00000563909 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 AADATQ8N5Z0 425 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 TMA16Q96EY4 203 aaKnown RBP16.49■□□□□ 0.23
RNF40-205ENST00000563909 ARHGAP20Q9P2F6 1191 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 HMGXB4Q9UGU5 601 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 STRIP2Q9ULQ0 834 aa16.49■□□□□ 0.23
RNF40-205ENST00000563909 ITPR2Q14571 2701 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 TNFSF15O95150 251 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 TGM2P21980 687 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 MAT2AP31153 395 aaKnown RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 CD70P32970 193 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 PSMD8P48556 350 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 DUSP3P51452 185 aaPredicted RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 NDST1P52848 882 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 ENPEPQ07075 957 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms