RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 TTC16Q8NEE8 873 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 RIN3Q8TB24 985 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 SH3RF2Q8TEC5 729 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 SEC14L1Q92503 715 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 RUBCNQ92622 972 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 ERP44Q9BS26 406 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 TMEM248Q9NWD8 314 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 LSM7Q9UK45 103 aaKnown RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 UTP11Q9Y3A2 253 aaKnown RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 RAD54BQ9Y620 910 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 SGK1O00141 431 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 GBP2P32456 591 aaPredicted RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 SLC45A4Q5BKX6 768 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 WDR93Q6P2C0 686 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 DARS2Q6PI48 645 aaKnown RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 HTR3DQ70Z44 454 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 DDX42Q86XP3 938 aaKnown RBP eCLIP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 CDKL3Q8IVW4 592 aaPredicted RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 ARHGAP12Q8IWW6 846 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 FAM217AQ8IXS0 508 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 FAM71DQ8N9W8 422 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 CELF6Q96J87 481 aaKnown RBP19.85■□□□□ 0.77
SPSB3-204ENST00000563741 LGMNQ99538 433 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 C1QTNF1Q9BXJ1 281 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 RAB17Q9H0T7 212 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 EPB41L5Q9HCM4 733 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 GDF3Q9NR23 364 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 TDP1Q9NUW8 608 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 LIMD1Q9UGP4 676 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 RAB21Q9UL25 225 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 SH3BP1Q9Y3L3 701 aa19.85■□□□□ 0.77
SPSB3-204ENST00000563741 BCLAF3A2AJT9 711 aaKnown RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 GFRA2O00451 464 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 TRDMT1O14717 391 aaKnown RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 SGSHP51688 502 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 RPS24P62847 133 aaKnown RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 GALNT2Q10471 571 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 PDK1Q15118 436 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 PRKD1Q15139 912 aaPredicted RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 TRADDQ15628 312 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 TRIP13Q15645 432 aaPredicted RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 RABGAP1LQ5R372 815 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 AFMIDQ63HM1 303 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 DUPD1Q68J44 220 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 PRUNE1Q86TP1 453 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 DDX50Q9BQ39 737 aaKnown RBP19.84■□□□□ 0.77
SPSB3-204ENST00000563741 TRIM31Q9BZY9 425 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 USP29Q9HBJ7 922 aa19.84■□□□□ 0.77
SPSB3-204ENST00000563741 HELZP42694 1942 aaKnown RBP19.83■□□□□ 0.77
SPSB3-204ENST00000563741 HACD1B0YJ81 288 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 IFNB1P01574 187 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 RBL1P28749 1068 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 NRLP54845 237 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 GET4Q7L5D6 327 aaPredicted RBP19.83■□□□□ 0.77
SPSB3-204ENST00000563741 BBS7Q8IWZ6 715 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 NPAS3Q8IXF0 933 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 CFAP52Q8N1V2 620 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 UMODL1-AS1Q8N2C9 162 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 LZTR1Q8N653 840 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 TFB1MQ8WVM0 346 aaKnown RBP19.83■□□□□ 0.77
SPSB3-204ENST00000563741 CASKIN2Q8WXE0 1202 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 RSAD2Q8WXG1 361 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 MYADMQ96S97 322 aa19.83■□□□□ 0.77
SPSB3-204ENST00000563741 NOL6Q9H6R4 1146 aaKnown RBP19.83■□□□□ 0.77
SPSB3-204ENST00000563741 ZFP37Q9Y6Q3 630 aaPredicted RBP19.83■□□□□ 0.77
SPSB3-204ENST00000563741 CFAP69A5D8W1 941 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 PPP1R12AO14974 1030 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-204ENST00000563741 NCAM2O15394 837 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 KRT14P02533 472 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ZSCAN5DPP0CG00 497 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ETS1P14921 441 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 VAV1P15498 845 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 MX2P20592 715 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 USP4Q13107 963 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ARID3BQ8IVW6 561 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-204ENST00000563741 RTP4Q96DX8 246 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 DPH5Q9H2P9 285 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 PCDH9Q9HC56 1237 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 EPS15L1Q9UBC2 864 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ASIC3Q9UHC3 531 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ZNF510Q9Y2H8 683 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 DOCK4Q8N1I0 1966 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 E2F8A0AVK6 867 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 KCNN4O15554 427 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 STIP1P31948 543 aaKnown RBP19.82■□□□□ 0.76
SPSB3-204ENST00000563741 GARSP41250 739 aaKnown RBP19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ZNF77Q15935 545 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 IFT20Q8IY31 132 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 CCDC89Q8N998 374 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 ZSCAN18Q8TBC5 510 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-204ENST00000563741 EDAQ92838 391 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 HDAC11Q96DB2 347 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 DONSONQ9NYP3 566 aa19.82■□□□□ 0.76
SPSB3-204ENST00000563741 TSPAN3O60637 253 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 TUBBP07437 444 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 MYBL2P10244 700 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 LAMP2P13473 410 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 TCF3P15923 654 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 TNFRSF8P28908 595 aa19.81■□□□□ 0.76
SPSB3-204ENST00000563741 RPL21P46778 160 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms