RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ERVPABLB-1P60509 514 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 SRSF6Q13247 344 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 KMT5BQ4FZB7 885 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 ZCWPW2Q504Y3 356 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 IQCHQ86VS3 1027 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 TRIM69Q86WT6 500 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 MFN1Q8IWA4 741 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 OXR1Q8N573 874 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 IQUBQ8NA54 791 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 OR52K2Q8NGK3 314 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 OR14C36Q8NHC7 312 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 GOLGA5Q8TBA6 731 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 GANCQ8TET4 914 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 KCNE4Q8WWG9 221 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 SLC39A13Q96H72 371 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 RPL10LQ96L21 214 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 LRRC27Q9C0I9 530 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 POLR1BQ9H9Y6 1135 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 MAGEF1Q9HAY2 307 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
SF3B3-204ENST00000563739 STIM2Q9P246 746 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 NCKAP1Q9Y2A7 1128 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 LRP4O75096 1905 aa10.73□□□□□ -0.69
SF3B3-204ENST00000563739 EDDM13A0A1B0GTR0 161 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 TARSL2A2RTX5 802 aaKnown RBP10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CAPN8A6NHC0 703 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 O00370 1275 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 MAPK13O15264 365 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 KLK10O43240 276 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CUTAO60888 179 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 USP12O75317 370 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 PIAS2O75928 621 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CALCAP01258 141 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 ASLP04424 464 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 ITGB6P18564 788 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 C5AR1P21730 350 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 IRAK1P51617 712 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 UCNP55089 124 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 NFKB2Q00653 900 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 KCNC4Q03721 635 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CNTN1Q12860 1018 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CLN3Q13286 438 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-204ENST00000563739 STK38Q15208 465 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 NFIL3Q16649 462 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 DCAF6Q58WW2 860 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 MS4A13Q5J8X5 152 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 TPRG1LQ5T0D9 272 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 RESP18Q5W5W9 173 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 GCNT7Q6ZNI0 430 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 CFAP52Q8N1V2 620 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 HJURPQ8NCD3 748 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-204ENST00000563739 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 TFAP2BQ92481 460 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 ALG14Q96F25 216 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 HEXIM2Q96MH2 286 aaKnown RBP10.72□□□□□ -0.69
SF3B3-204ENST00000563739 OMDQ99983 421 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-204ENST00000563739 SERTAD1Q9UHV2 236 aa10.72□□□□□ -0.69
SF3B3-204ENST00000563739 FFAR2O15552 330 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 YEATS4O95619 227 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 ADH1BP00325 375 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 CTSLP07711 333 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 SRPRAP08240 638 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 PRLRP16471 622 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 TGM2P21980 687 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 PITX1P78337 314 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 E2F1Q01094 437 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 AMPD3Q01432 767 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 BST2Q10589 180 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 EIF4EBP2Q13542 120 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 ISXQ2M1V0 245 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 POM121L1PQ3SYA9 428 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 ARTNQ5T4W7 220 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 PIP5KL1Q5T9C9 394 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 CXorf57Q6NSI4 855 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 PMF1Q6P1K2 205 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 TMC6Q7Z403 805 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 OR13H1Q8NG92 308 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 UBA3Q8TBC4 463 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 AZIN2Q96A70 460 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 APOLD1Q96LR9 279 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 MYOCQ99972 504 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 MMRN2Q9H8L6 949 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 TMEM8AQ9HCN3 771 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 FZD3Q9NPG1 666 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 PNMA8BQ9ULN7 279 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 ZFR2Q9UPR6 939 aaKnown RBP10.71□□□□□ -0.69
SF3B3-204ENST00000563739 SATB2Q9UPW6 733 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 ENTPD2Q9Y5L3 495 aa10.71□□□□□ -0.69
SF3B3-204ENST00000563739 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 PIK3R2O00459 728 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 IRAK2O43187 625 aa10.7□□□□□ -0.7
SF3B3-204ENST00000563739 NEBLO76041 1014 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms