RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NENFQ9UMX5 172 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 CYP8B1Q9UNU6 501 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 DOCK9Q9BZ29 2069 aa15.24■□□□□ 0.03
RPUSD1-204ENST00000563560 TYW5A2RUC4 315 aaKnown RBP15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 TTC34A8MYJ7 566 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 PATE3B3GLJ2 98 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 E9PAM4 449 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM72CH0Y354 149 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 H0Y626 953 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 SIN3BO75182 1162 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 KRT3P12035 628 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 RRM1P23921 792 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 ADRA1BP35368 520 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 STK19P49842 368 aaPredicted RBP15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 LIMK1P53667 647 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 ATP11AP98196 1134 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 ECT2LQ008S8 904 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF252P-AS1Q0IIN9 211 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 SCAPQ12770 1279 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 BYSLQ13895 437 aaKnown RBP15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 RSPO4Q2I0M5 234 aaPredicted RBP15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FNDC3BQ53EP0 1204 aaKnown RBP15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM72AQ5TYM5 149 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 PLEKHA7Q6IQ23 1121 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM72DQ6L9T8 149 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM72BQ86X60 149 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 PGBD3Q8N328 593 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 ARFGAP1Q8N6T3 406 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 CCDC185Q8N715 623 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 PTPRN2Q92932 1015 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 NTAN1Q96AB6 310 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM131CQ96AQ9 280 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 VCPIP1Q96JH7 1222 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 SPACA7Q96KW9 195 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 USP18Q9UMW8 372 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 PLA2G4CQ9UP65 541 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
RPUSD1-204ENST00000563560 LNP1A1A4G5 178 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 PRR5-ARHGAP8B1AHC4 643 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 CCP110O43303 1012 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SERPINC1P01008 464 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 GYPCP04921 128 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 GZMAP12544 262 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 ITPKAP23677 461 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SDC4P31431 198 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 ID4P47928 161 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF143P52747 638 aaPredicted RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 UBASH3AP57075 661 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 ARHGAP8P85298 464 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 CREB5Q02930 508 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SEMA3BQ13214 749 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 KIAA1324Q6UXG2 1013 aaKnown RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SLC36A4Q6YBV0 504 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 LPCAT2Q7L5N7 544 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 NLRP14Q86W24 1093 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 C1orf216Q8TAB5 229 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 FAM172AQ8WUF8 416 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SYN2Q92777 582 aaPredicted RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 VOPP1Q96AW1 172 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 SIPA1Q96FS4 1042 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 OSBPL2Q9H1P3 480 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 FBRSQ9HAH7 460 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 MPP6Q9NZW5 540 aa15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 PPARGC1AQ9UBK2 798 aaKnown RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 EVLQ9UI08 416 aaPredicted RBP15.22■□□□□ 0.03
RPUSD1-204ENST00000563560 TMEM131Q92545 1883 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 A0A0D9SEW6 157 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SLC30A4O14863 429 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ATP9BO43861 1147 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SYNCRIPO60506 623 aaKnown RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 FOXD2O60548 495 aaPredicted RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ZMPSTE24O75844 475 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 CCDC172P0C7W6 258 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 VAV1P15498 845 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 GPD1P21695 349 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 CD6P30203 668 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 NUMBP49757 651 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 RPL6Q02878 288 aaKnown RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ZNF33AQ06730 810 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 MAMLD1Q13495 774 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ASIC2Q16515 512 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SFMBT2Q5VUG0 894 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SND1Q7KZF4 910 aaKnown RBP eCLIP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SETD3Q86TU7 594 aaPredicted RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 DNASE2BQ8WZ79 361 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 TOE1Q96GM8 510 aaKnown RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 RPL10LQ96L21 214 aaKnown RBP15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ORAI3Q9BRQ5 295 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 ISCUQ9H1K1 167 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 NDFIP2Q9NV92 336 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SERGEFQ9UGK8 458 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 SUN2Q9UH99 717 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 CAPN11Q9UMQ6 739 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 HS3ST2Q9Y278 367 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 PAXBP1Q9Y5B6 917 aa15.21■□□□□ 0.03
RPUSD1-204ENST00000563560 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms