RNA–Protein interactions for RNA: ENST00000561642.1

AC133561.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC133561.2, Length 1,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133561.2-202ENST00000561642 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 NHEJ1Q9H9Q4 299 aaPredicted RBP9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 SEPT11Q9NVA2 429 aaKnown RBP9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 STIM2Q9P246 746 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 SLCO3A1Q9UIG8 710 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 SLC8A2Q9UPR5 921 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 GVINP1Q7Z2Y8 2422 aa9.41□□□□□ -0.9
AC133561.2-202ENST00000561642 A0A0D9SEW6 157 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ILVBLA1L0T0 632 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 AXIN1O15169 862 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ATP9BO43861 1147 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ASLP04424 464 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 SRPRAP08240 638 aaKnown RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 RHOQP17081 205 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 IL4RP24394 825 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 MIPP30301 263 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 HCAR3P49019 387 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ARSEP51690 589 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 CA9Q16790 459 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 CDO1Q16878 200 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 HNRNPA1L2Q32P51 320 aaKnown RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 RABGAP1LQ5R372 815 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 C9orf64Q5T6V5 341 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 AFMIDQ63HM1 303 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ZNF783Q6ZMS7 281 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 SND1Q7KZF4 910 aaKnown RBP eCLIP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 SLFN11Q7Z7L1 901 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 PSTKQ8IV42 348 aaKnown RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 CARNMT1Q8N4J0 409 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 FRMD1Q8N878 549 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 PTPRN2Q92932 1015 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 RNF34Q969K3 372 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ZNF653Q96CK0 615 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 TRIM11Q96F44 468 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 RPRD1AQ96P16 312 aaPredicted RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 DUSP15Q9H1R2 295 aaPredicted RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 MRPL47Q9HD33 250 aaKnown RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 PRSS16Q9NQE7 514 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ITM2CQ9NQX7 267 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 TMEM248Q9NWD8 314 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 MBD1Q9UIS9 605 aaPredicted RBP9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 ERVW-1Q9UQF0 538 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 HS3ST2Q9Y278 367 aa9.4□□□□□ -0.9
AC133561.2-202ENST00000561642 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.91
AC133561.2-202ENST00000561642 EML5Q05BV3 1969 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 DOCK4Q8N1I0 1966 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 CHD5Q8TDI0 1954 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 MT-CO1P00395 513 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ATP5BP06576 529 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TMEM253P0C7T8 217 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 HOXB2P14652 356 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 NDUFV2P19404 249 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 CDC25BP30305 580 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 WASP42768 502 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 OXCT1P55809 520 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ECT2LQ008S8 904 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 SLC25A11Q02978 314 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TDRD12Q587J7 1177 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TXNRD3NBQ6F5E7 133 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 DCUN1D2Q6PH85 259 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 CPNE8Q86YQ8 564 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 CHPFQ8IZ52 775 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 UMODL1-AS1Q8N2C9 162 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TSTD1Q8NFU3 115 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ATRIPQ8WXE1 791 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TSC1Q92574 1164 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 PANX2Q96RD6 677 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 ZYG11BQ9C0D3 744 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 MTG2Q9H4K7 406 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 INTUQ9ULD6 942 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 RAD54BQ9Y620 910 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 SCINQ9Y6U3 715 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
AC133561.2-202ENST00000561642 TARSL2A2RTX5 802 aaKnown RBP9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 TTC34A8MYJ7 566 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 EIF3CLB5ME19 914 aaKnown RBP9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 H0Y626 953 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 DCLK1O15075 740 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 SRGAP2O75044 1071 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 LMNAP02545 664 aaKnown RBP9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 HLA-EP13747 358 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 POLR2EP19388 210 aaKnown RBP9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 BCKDHBP21953 392 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 PSMA2P25787 234 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 HTR7P34969 479 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 MAPKAPK2P49137 400 aa9.38□□□□□ -0.91
AC133561.2-202ENST00000561642 MRE11P49959 708 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms